7AQH | pdb_00007aqh

Cell wall binding domain of the Staphylococcal phage 2638A endolysin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth F]	Ariadne	e7aqhF1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
G [auth E]	Ariadne	e7aqhE1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
F [auth B]	Ariadne	e7aqhB1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
E [auth H]	Ariadne	e7aqhH1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
D [auth G]	Ariadne	e7aqhG1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
C	Ariadne	e7aqhC1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
B [auth D]	Ariadne	e7aqhD1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)
A	Ariadne	e7aqhA1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: Ariadne	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	PF08460	Bacterial SH3 domain (SH3_5)	Bacterial SH3 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	ORF007	peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding peptidoglycan muralytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding peptidoglycan muralytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides N-acetylmuramoyl-L-alanine amidase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing proteolysis metabolic process biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process defense response to bacterium response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus carbohydrate derivative catabolic process catabolic process peptidoglycan catabolic process glycosaminoglycan metabolic process carbohydrate derivative metabolic process aminoglycan catabolic process macromolecule catabolic process glycosaminoglycan catabolic process aminoglycan metabolic process peptidoglycan metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR011055	Duplicated hybrid motif	Homologous Superfamily
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR050570	Bacterial cell wall metabolism enzyme	Family
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR003646	SH3-like domain, bacterial-type	Domain
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR002502	N-acetylmuramoyl-L-alanine amidase domain	Domain
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR036505	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	Homologous Superfamily
A, B [auth D], C, D [auth G], E [auth H], A, B [auth D], C, D [auth G], E [auth H], F [auth B], G [auth E], H [auth F]	IPR016047	M23ase, beta-sheet core domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.