Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyvWA-like8035574 3000832 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilySPOC domain-like8035571 3000675 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilySPOC domain-like8035577 3000675 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyvWA-like8035579 3000832 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]PF02735,PF03730e7zvtA2 A: beta barrelsX: SPOC domain-likeH: SPOC domain-relatedT: Ku70/80 subunit middle domainF: PF02735,PF03730ECOD (1.6)
C [auth A]PF03731e7zvtA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF03731ECOD (1.6)
D [auth B]PF02735,PF03730e7zvtB1 A: beta barrelsX: SPOC domain-likeH: SPOC domain-relatedT: Ku70/80 subunit middle domainF: PF02735,PF03730ECOD (1.6)
D [auth B]PF03731e7zvtB2 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF03731ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF02735Ku70/Ku80 beta-barrel domain (Ku)Ku70/Ku80 beta-barrel domainThe Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-bi ...The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-binding beta-barrel domain. This domain is found in both the Ku70 Swiss:P12956 and Ku80 Swiss:P13010 proteins that form a DNA binding heterodimer [1].
Domain
C [auth A]PF03730Ku70/Ku80 C-terminal arm (Ku_C)Ku70/Ku80 C-terminal arm- Family
C [auth A]PF03731Ku70/Ku80 N-terminal alpha/beta domain (Ku_N)Ku70/Ku80 N-terminal alpha/beta domainThe Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal ...The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal alpha/beta domain. This domain only makes a small contribution to the dimer interface. The domain comprises a six stranded beta sheet of the Rossman fold [1].
Domain
D [auth B]PF02735Ku70/Ku80 beta-barrel domain (Ku)Ku70/Ku80 beta-barrel domainThe Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-bi ...The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-binding beta-barrel domain. This domain is found in both the Ku70 Swiss:P12956 and Ku80 Swiss:P13010 proteins that form a DNA binding heterodimer [1].
Domain
D [auth B]PF03730Ku70/Ku80 C-terminal arm (Ku_C)Ku70/Ku80 C-terminal arm- Family
D [auth B]PF03731Ku70/Ku80 N-terminal alpha/beta domain (Ku_N)Ku70/Ku80 N-terminal alpha/beta domainThe Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal ...The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal alpha/beta domain. This domain only makes a small contribution to the dimer interface. The domain comprises a six stranded beta sheet of the Rossman fold [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth D]DNA (5'-D(P*CP*GP*AP*TP*AP*TP*CP*TP*AP*GP*AP*GP*GP*GP*AP*T)-3')---
C [auth A]X-ray repair cross-complementing protein 6
A [auth C]DNA (5'-D(P*TP*CP*CP*CP*TP*CP*TP*AP*GP*AP*TP*AP*TP*C)-3')---
D [auth B]X-ray repair cross-complementing protein 5