7ZS5

Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth BE]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
J [auth BE]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
K [auth BF]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
L [auth BG]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
M [auth BH]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
M [auth BH]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
N [auth BI]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
P [auth BL]SCOP2B SuperfamilyRL5-like8099392 3001709 SCOP2B (2022-06-29)
Q [auth BM]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
S [auth BO]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
T [auth BP]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
U [auth BQ]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
V [auth BR]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
W [auth BS]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
Z [auth BV]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
AA [auth BW]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
CA [auth BY]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
DA [auth BZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
EA [auth Ba]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
FA [auth Bb]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
GA [auth Bc]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
HA [auth Bd]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
KA [auth Bg]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
LA [auth Bh]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
D [auth A]SCOP2B SuperfamilyPentein8036230 3000640 SCOP2B (2022-06-29)
NA [auth Bj]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
OA [auth Bk]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
PA [auth Bl]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
QA [auth Bm]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
SA [auth BK]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
G [auth BB]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
I [auth BD]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth BE]PF00573e7zs5BE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
J [auth BE]PF14374e7zs5BE2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
K [auth BF]PF14204,PF17144e7zs5BF1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
L [auth BG]PF01159e7zs5BG1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
M [auth BH]PF00327,PF08079e7zs5BH1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
N [auth BI]PF01248e7zs5BI1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
O [auth BJ]PF00347e7zs5BJ1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
P [auth BL]PF00281,PF00673e7zs5BL1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
Q [auth BM]PF01294e7zs5BM1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
R [auth BN]PF00467,PF01929e7zs5BN1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
S [auth BO]PF00827e7zs5BO1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
T [auth BP]PF00572e7zs5BP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
U [auth BQ]PF00237e7zs5BQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
V [auth BR]PF17135e7zs5BR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
W [auth BS]PF01280e7zs5BS2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
W [auth BS]PF01280e7zs5BS1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
X [auth BT]F_UNCLASSIFIEDe7zs5BT2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
X [auth BT]PF01775e7zs5BT1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
Y [auth BU]PF01157e7zs5BU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
Z [auth BV]PF01776e7zs5BV1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
AA [auth BW]PF00238e7zs5BW1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
BA [auth BX]PF01246e7zs5BX1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
CA [auth BY]PF00276,PF03939e7zs5BY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
DA [auth BZ]PF16906e7zs5BZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
EA [auth Ba]PF01777e7zs5Ba1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
FA [auth Bb]PF00828e7zs5Bb1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
GA [auth Bc]PF01779e7zs5Bc1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
HA [auth Bd]PF01248e7zs5Bd1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
IA [auth Be]PF01198e7zs5Be1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
JA [auth Bf]PF01655e7zs5Bf1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
KA [auth Bg]PF01247e7zs5Bg1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
LA [auth Bh]PF01199e7zs5Bh1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
MA [auth Bi]PF00831e7zs5Bi1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
D [auth A]PF01912e7zs5A1 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: PF01912ECOD (1.6)
NA [auth Bj]PF01158e7zs5Bj1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
OA [auth Bk]PF01907e7zs5Bk1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
PA [auth Bl]PF01781e7zs5Bl1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
QA [auth Bm]PF00832e7zs5Bm1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
RA [auth Bn]PF01020e7zs5Bn1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
SA [auth BK]PF00252e7zs5BK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
F [auth BA]PF00935e7zs5BA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
G [auth BB]PF01780e7zs5BB1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
H [auth BC]PF00181e7zs5BC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
H [auth BC]PF03947e7zs5BC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
I [auth BD]PF00297e7zs5BD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth BE]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
J [auth BE]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
K [auth BF]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
K [auth BF]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
L [auth BG]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
M [auth BH]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
M [auth BH]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
N [auth BI]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth BJ]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
P [auth BL]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
P [auth BL]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
Q [auth BM]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
R [auth BN]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
R [auth BN]PF00467KOW motif (KOW)KOW motif- Family
S [auth BO]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
T [auth BP]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
U [auth BQ]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
V [auth BR]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
W [auth BS]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
X [auth BT]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
Y [auth BU]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
Z [auth BV]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
AA [auth BW]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
BA [auth BX]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
CA [auth BY]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
CA [auth BY]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DA [auth BZ]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
DA [auth BZ]PF00467KOW motif (KOW)KOW motif- Family
EA [auth Ba]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
FA [auth Bb]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
GA [auth Bc]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
HA [auth Bd]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
IA [auth Be]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
JA [auth Bf]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
KA [auth Bg]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
LA [auth Bh]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
MA [auth Bi]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
D [auth A]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
NA [auth Bj]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
OA [auth Bk]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
PA [auth Bl]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
QA [auth Bm]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
RA [auth Bn]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
SA [auth BK]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
F [auth BA]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
G [auth BB]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
H [auth BC]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
H [auth BC]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
I [auth BD]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]25S ribosomal RNA---
J [auth BE]60S ribosomal protein L4-A
K [auth BF]60S ribosomal protein L5
L [auth BG]60S ribosomal protein L6-A
M [auth BH]60S ribosomal protein L7-A
N [auth BI]60S ribosomal protein L8-A
O [auth BJ]60S ribosomal protein L9-A
P [auth BL]60S ribosomal protein L11-B
Q [auth BM]60S ribosomal protein L13-A
R [auth BN]60S ribosomal protein L14-A
S [auth BO]60S ribosomal protein L15-A
B [auth 3]5S ribosomal RNA---
T [auth BP]60S ribosomal protein L16-A
U [auth BQ]60S ribosomal protein L17-A
V [auth BR]60S ribosomal protein L18-A
W [auth BS]60S ribosomal protein L19-A
X [auth BT]60S ribosomal protein L20-A
Y [auth BU]60S ribosomal protein L21-A
Z [auth BV]60S ribosomal protein L22-A
AA [auth BW]60S ribosomal protein L23-A
BA [auth BX]60S ribosomal protein L24-A
CA [auth BY]60S ribosomal protein L25
C [auth 4]5.8S ribosomal RNA---
DA [auth BZ]60S ribosomal protein L26-A
EA [auth Ba]60S ribosomal protein L27-A
FA [auth Bb]60S ribosomal protein L28
GA [auth Bc]60S ribosomal protein L29
HA [auth Bd]60S ribosomal protein L30
IA [auth Be]60S ribosomal protein L31-A
JA [auth Bf]60S ribosomal protein L32
KA [auth Bg]60S ribosomal protein L33-A
LA [auth Bh]60S ribosomal protein L34-A
MA [auth Bi]60S ribosomal protein L35-A
D [auth A]Eukaryotic translation initiation factor 6
NA [auth Bj]60S ribosomal protein L36-A
OA [auth Bk]60S ribosomal protein L37-A
PA [auth Bl]60S ribosomal protein L38
QA [auth Bm]60S ribosomal protein L39
RA [auth Bn]60S ribosomal protein L40-A
SA [auth BK]60S ribosomal protein L10
E [auth 2]tRNA---
F [auth BA]60S ribosomal protein L42-A
G [auth BB]60S ribosomal protein L43-A
H [auth BC]60S ribosomal protein L2-A
I [auth BD]60S ribosomal protein L3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth BE]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
J [auth BE]IPR002136Large ribosomal subunit protein uL4Family
J [auth BE]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
J [auth BE]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
J [auth BE]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
K [auth BF]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
K [auth BF]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
L [auth BG]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
L [auth BG]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth BG]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
L [auth BG]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth BG]IPR000915Large ribosomal subunit protein eL6Family
M [auth BH]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
M [auth BH]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
M [auth BH]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
M [auth BH]IPR039699Large ribosomal subunit protein uL30Family
M [auth BH]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
M [auth BH]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
M [auth BH]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
N [auth BI]IPR001921Large ribosomal subunit protein eL8Family
N [auth BI]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
N [auth BI]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
N [auth BI]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
N [auth BI]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
O [auth BJ]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
O [auth BJ]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
O [auth BJ]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
O [auth BJ]IPR000702Large ribosomal subunit protein uL6-likeFamily
P [auth BL]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
P [auth BL]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
P [auth BL]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
P [auth BL]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
P [auth BL]IPR002132Large ribosomal subunit protein uL5Family
Q [auth BM]IPR001380Large ribosomal subunit protein eL13Family
Q [auth BM]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
R [auth BN]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
R [auth BN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth BN]IPR039660Large ribosomal subunit protein eL14Family
R [auth BN]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
R [auth BN]IPR002784Large ribosomal subunit protein eL14 domainDomain
R [auth BN]IPR005824KOWDomain
S [auth BO]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth BO]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
S [auth BO]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
S [auth BO]IPR000439Large ribosomal subunit protein eL15Family
T [auth BP]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
T [auth BP]IPR005822Large ribosomal subunit protein uL13Family
T [auth BP]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth BP]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
U [auth BQ]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth BQ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth BQ]IPR001063Large ribosomal subunit protein uL22Family
U [auth BQ]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
V [auth BR]IPR021131Large ribosomal subunit protein uL15/eL18Domain
V [auth BR]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
V [auth BR]IPR000039Large ribosomal subunit protein eL18Family
V [auth BR]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth BS]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
W [auth BS]IPR039547Large ribosomal subunit protein eL19Family
W [auth BS]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
W [auth BS]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
W [auth BS]IPR000196Large ribosomal subunit protein eL19 domainDomain
W [auth BS]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
X [auth BT]IPR028877Large ribosomal subunit protein eL20Family
X [auth BT]IPR023573Large ribosomal subunit protein eL20 domainDomain
X [auth BT]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
Y [auth BU]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
Y [auth BU]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
Y [auth BU]IPR001147Large ribosomal subunit protein eL21Family
Y [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth BV]IPR002671Large ribosomal subunit protein eL22Family
Z [auth BV]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
AA [auth BW]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
AA [auth BW]IPR000218Large ribosomal subunit protein uL14Family
AA [auth BW]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
BA [auth BX]IPR000988Large ribosomal subunit protein eL24-relatedFamily
BA [auth BX]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
BA [auth BX]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
CA [auth BY]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
CA [auth BY]IPR013025Large ribosomal subunit protein uL23-likeFamily
CA [auth BY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth BY]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
CA [auth BY]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
DA [auth BZ]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
DA [auth BZ]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
DA [auth BZ]IPR005824KOWDomain
DA [auth BZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth BZ]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
DA [auth BZ]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth Ba]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
EA [auth Ba]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
EA [auth Ba]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EA [auth Ba]IPR001141Large ribosomal subunit protein eL27Family
EA [auth Ba]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
FA [auth Bb]IPR021131Large ribosomal subunit protein uL15/eL18Domain
FA [auth Bb]IPR030878Large ribosomal subunit protein uL15Family
FA [auth Bb]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
FA [auth Bb]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
GA [auth Bc]IPR002673Large ribosomal subunit protein eL29Family
HA [auth Bd]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
HA [auth Bd]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
HA [auth Bd]IPR039109Large ribosomal subunit protein eL30-likeFamily
HA [auth Bd]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IA [auth Be]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
IA [auth Be]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
IA [auth Be]IPR000054Large ribosomal subunit protein eL31Family
JA [auth Bf]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
JA [auth Bf]IPR001515Large ribosomal subunit protein eL32Family
JA [auth Bf]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
KA [auth Bg]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
KA [auth Bg]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
KA [auth Bg]IPR001780Large ribosomal subunit protein eL33Family
KA [auth Bg]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
LA [auth Bh]IPR008195Large ribosomal subunit protein eL34Family
LA [auth Bh]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
MA [auth Bi]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
MA [auth Bi]IPR001854Large ribosomal subunit protein uL29Family
MA [auth Bi]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
MA [auth Bi]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
D [auth A]IPR002769Translation initiation factor IF6Family
NA [auth Bj]IPR000509Large ribosomal subunit protein eL36Family
NA [auth Bj]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
OA [auth Bk]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
OA [auth Bk]IPR001569Large ribosomal subunit protein eL37Family
OA [auth Bk]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
OA [auth Bk]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
PA [auth Bl]IPR002675Large ribosomal subunit protein eL38Family
PA [auth Bl]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
QA [auth Bm]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
QA [auth Bm]IPR000077Large ribosomal subunit protein eL39Family
QA [auth Bm]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
RA [auth Bn]IPR019954Ubiquitin conserved siteConserved Site
RA [auth Bn]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
RA [auth Bn]IPR000626Ubiquitin-like domainDomain
RA [auth Bn]IPR019956Ubiquitin domainDomain
RA [auth Bn]IPR001975Large ribosomal subunit protein eL40 domainDomain
RA [auth Bn]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
SA [auth BK]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
SA [auth BK]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
SA [auth BK]IPR016180Large ribosomal subunit protein uL16 domainDomain
SA [auth BK]IPR047873Large ribosomal subunit protein uL16Family
SA [auth BK]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
F [auth BA]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth BA]IPR000552Large ribosomal subunit protein eL42Family
G [auth BB]IPR002674Large ribosomal subunit protein eL43Family
G [auth BB]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
G [auth BB]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
H [auth BC]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
H [auth BC]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth BC]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth BC]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
H [auth BC]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth BC]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
H [auth BC]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
H [auth BC]IPR002171Large ribosomal subunit protein uL2Family
I [auth BD]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
I [auth BD]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
I [auth BD]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
I [auth BD]IPR000597Large ribosomal subunit protein uL3Family
I [auth BD]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily