7ZRS

Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth AE]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
J [auth AE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
J [auth AE]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
K [auth AF]SCOP2B SuperfamilyRibosomal protein S78065993 3000799 SCOP2B (2022-06-29)
L [auth AG]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
N [auth AI]SCOP2B Superfamily50S Ribosomal protein L14-like8053083 3000433 SCOP2B (2022-06-29)
P [auth AK]SCOP2B SuperfamilyWinged helix DNA-binding domain8055713 3000034 SCOP2B (2022-06-29)
Q [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
Q [auth AL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
R [auth AM]SCOP2B SuperfamilyL30e-like8096946 3001739 SCOP2B (2022-06-29)
S [auth AN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
S [auth AN]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
T [auth AO]SCOP2B SuperfamilyTranslational machinery components8098660 3000571 SCOP2B (2022-06-29)
U [auth AP]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
V [auth AQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
X [auth AS]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
Z [auth AU]SCOP2B SuperfamilyRibosomal protein S108098648 3001336 SCOP2B (2022-06-29)
AA [auth AV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
BA [auth AW]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)
EA [auth AZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2B (2022-06-29)
FA [auth Aa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053149 3000068 SCOP2B (2022-06-29)
HA [auth Ac]SCOP2B SuperfamilyNucleic acid-binding proteins8063430 3000135 SCOP2B (2022-06-29)
IA [auth Ad]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)
JA [auth Ae]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
NA [auth BB]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
OA [auth BC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
OA [auth BC]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
PA [auth BD]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
RA [auth BF]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
RA [auth BF]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
SA [auth BG]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
UA [auth BI]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
VA [auth BJ]SCOP2B SuperfamilyRL5-like8073884 3001709 SCOP2B (2022-06-29)
WA [auth BK]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
YA [auth BM]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
ZA [auth BN]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
AB [auth BO]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
BB [auth BP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
CB [auth BQ]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
FB [auth BT]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
GB [auth BU]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
F [auth AA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2B (2022-06-29)
IB [auth BW]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
JB [auth BX]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
KB [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
LB [auth BZ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
MB [auth Ba]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
NB [auth Bb]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
QB [auth Be]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
G [auth AB]SCOP2B SuperfamilyRibosomal S3Ae-like8053211 3002166 SCOP2B (2022-06-29)
RB [auth Bf]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
TB [auth Bh]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
UB [auth Bi]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
VB [auth Bj]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
WB [auth Bk]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
AC [auth Bo]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth AE]PF00900e7zrsAE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
J [auth AE]PF00467,PF16121e7zrsAE3 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
J [auth AE]PF00900,PF01479,PF08071e7zrsAE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
K [auth AF]PF00177e7zrsAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
L [auth AG]PF01092e7zrsAG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
M [auth AH]PF01251e7zrsAH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
N [auth AI]PF01201e7zrsAI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
O [auth AJ]PF00163,PF01479e7zrsAJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
P [auth AK]PF03501e7zrsAK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
Q [auth AL]PF00366,PF16205e7zrsAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
R [auth AM]PF01248e7zrsAM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
S [auth AN]PF08069e7zrsAN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
S [auth AN]PF00312e7zrsAN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
T [auth AO]PF00411e7zrsAO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
U [auth AP]PF00203e7zrsAP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
V [auth AQ]PF00380e7zrsAQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
W [auth AR]PF00833e7zrsAR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
X [auth AS]PF00416e7zrsAS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
Y [auth AT]PF01090e7zrsAT1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
Z [auth AU]PF00338e7zrsAU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
AA [auth AV]PF01249e7zrsAV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
BA [auth AW]PF00410e7zrsAW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
BA [auth AW]PF00410e7zrsAW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
CA [auth AX]PF00164e7zrsAX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
DA [auth AY]PF01282e7zrsAY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
EA [auth AZ]PF03297e7zrsAZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
FA [auth Aa]PF01283e7zrsAa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
GA [auth Ab]PF01667e7zrsAb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
HA [auth Ac]PF01200e7zrsAc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
IA [auth Ad]PF00253e7zrsAd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
JA [auth Ae]PF04758e7zrsAe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
KA [auth Af]PF01599e7zrsAf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
LA [auth Ag]PF00400e7zrsAg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
MA [auth BA]PF00181e7zrsBA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
MA [auth BA]PF03947e7zrsBA1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
NA [auth BB]PF00297e7zrsBB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
OA [auth BC]PF00573e7zrsBC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
OA [auth BC]PF14374e7zrsBC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
PA [auth BD]PF14204,PF17144e7zrsBD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
QA [auth BE]PF01159e7zrsBE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
RA [auth BF]PF00327,PF08079e7zrsBF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
SA [auth BG]PF01248e7zrsBG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
TA [auth BH]PF00347e7zrsBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
UA [auth BI]PF00252e7zrsBI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
VA [auth BJ]PF00281,PF00673e7zrsBJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
WA [auth BK]PF01294e7zrsBK1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
XA [auth BL]PF00467,PF01929e7zrsBL1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
YA [auth BM]PF00827e7zrsBM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
ZA [auth BN]PF00572e7zrsBN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
AB [auth BO]PF00237e7zrsBO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
BB [auth BP]PF17135e7zrsBP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
CB [auth BQ]PF01280e7zrsBQ2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
CB [auth BQ]PF01280e7zrsBQ1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
DB [auth BR]F_UNCLASSIFIEDe7zrsBR2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
DB [auth BR]PF01775e7zrsBR1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
EB [auth BS]PF01157e7zrsBS1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
FB [auth BT]PF01776e7zrsBT1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
GB [auth BU]PF00238e7zrsBU1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
F [auth AA]PF00318e7zrsAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
HB [auth BV]PF01246e7zrsBV1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
IB [auth BW]PF00276,PF03939e7zrsBW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
JB [auth BX]PF16906e7zrsBX1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
KB [auth BY]PF01777e7zrsBY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
LB [auth BZ]PF00828e7zrsBZ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
MB [auth Ba]PF01779e7zrsBa1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
NB [auth Bb]PF01248e7zrsBb1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
OB [auth Bc]PF01198e7zrsBc1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
PB [auth Bd]PF01655e7zrsBd1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
QB [auth Be]PF01247e7zrsBe1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
G [auth AB]PF01015e7zrsAB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
G [auth AB]PF01015e7zrsAB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
RB [auth Bf]PF01199e7zrsBf1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
SB [auth Bg]PF00831e7zrsBg1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
TB [auth Bh]PF01158e7zrsBh1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
UB [auth Bi]PF01907e7zrsBi1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
VB [auth Bj]PF01781e7zrsBj1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
WB [auth Bk]PF00832e7zrsBk1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
XB [auth Bl]PF01020e7zrsBl1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
YB [auth Bm]PF05162e7zrsBm1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
ZB [auth Bn]PF00935e7zrsBn1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
AC [auth Bo]PF01780e7zrsBo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
H [auth AC]PF03719e7zrsAC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
H [auth AC]PF00333e7zrsAC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
H [auth AC]PF00333e7zrsAC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
I [auth AD]PF00189e7zrsAD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
I [auth AD]PF07650e7zrsAD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth AE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
J [auth AE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
J [auth AE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
J [auth AE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
J [auth AE]PF00467KOW motif (KOW)KOW motif- Family
K [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
L [auth AG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
M [auth AH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
N [auth AI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
O [auth AJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
O [auth AJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
P [auth AK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
Q [auth AL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
Q [auth AL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
R [auth AM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
S [auth AN]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
S [auth AN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
T [auth AO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
U [auth AP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
V [auth AQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
W [auth AR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
X [auth AS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
Y [auth AT]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
Z [auth AU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
AA [auth AV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
BA [auth AW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
CA [auth AX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
DA [auth AY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
EA [auth AZ]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
FA [auth Aa]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
GA [auth Ab]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
HA [auth Ac]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
IA [auth Ad]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
JA [auth Ae]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
KA [auth Af]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
LA [auth Ag]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
MA [auth BA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
MA [auth BA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
NA [auth BB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
OA [auth BC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
OA [auth BC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PA [auth BD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth BD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
QA [auth BE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
RA [auth BF]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
RA [auth BF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
SA [auth BG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
TA [auth BH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
UA [auth BI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
VA [auth BJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
VA [auth BJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
WA [auth BK]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
XA [auth BL]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
XA [auth BL]PF00467KOW motif (KOW)KOW motif- Family
YA [auth BM]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
ZA [auth BN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
AB [auth BO]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
BB [auth BP]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
CB [auth BQ]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
DB [auth BR]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
EB [auth BS]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
FB [auth BT]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
GB [auth BU]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
F [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
HB [auth BV]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
IB [auth BW]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
IB [auth BW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
JB [auth BX]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
JB [auth BX]PF00467KOW motif (KOW)KOW motif- Family
KB [auth BY]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
LB [auth BZ]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
MB [auth Ba]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
NB [auth Bb]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OB [auth Bc]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PB [auth Bd]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
QB [auth Be]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
RB [auth Bf]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
SB [auth Bg]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TB [auth Bh]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
UB [auth Bi]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
VB [auth Bj]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
WB [auth Bk]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
XB [auth Bl]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
YB [auth Bm]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
ZB [auth Bn]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
AC [auth Bo]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
H [auth AC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
H [auth AC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
BC [auth CA]PF02889Sec63 Brl domain (Sec63)Sec63 Brl domain- Family
BC [auth CA]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
BC [auth CA]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
I [auth AD]PF07650KH domain (KH_2)KH domain- Domain
I [auth AD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]18S ribosomal RNA---
J [auth AE]40S ribosomal protein S4-A
K [auth AF]Rps5p
L [auth AG]40S ribosomal protein S6-A
M [auth AH]40S ribosomal protein S7-A
N [auth AI]40S ribosomal protein S8-A
O [auth AJ]40S ribosomal protein S9-A
P [auth AK]40S ribosomal protein S10-A
Q [auth AL]40S ribosomal protein S11-A
R [auth AM]40S ribosomal protein S12
S [auth AN]40S ribosomal protein S13
B [auth 3]5.8S ribosomal RNA---
T [auth AO]40S ribosomal protein S14-B
U [auth AP]RPS15 isoform 1
V [auth AQ]40S ribosomal protein S16-A
W [auth AR]40S ribosomal protein S17-A
X [auth AS]40S ribosomal protein S18-A
Y [auth AT]40S ribosomal protein S19-A
Z [auth AU]RPS20 isoform 1
AA [auth AV]40S ribosomal protein S21-A
BA [auth AW]RPS22A isoform 1
CA [auth AX]40S ribosomal protein S23-A
C [auth 4]5S ribosomal RNA---
DA [auth AY]40S ribosomal protein S24-A
EA [auth AZ]40S ribosomal protein S25
FA [auth Aa]RPS26B isoform 1
GA [auth Ab]40S ribosomal protein S27-A
HA [auth Ac]RPS28A isoform 1
IA [auth Ad]RPS29A isoform 1
JA [auth Ae]40S ribosomal protein S30-A
KA [auth Af]RPS31 isoform 1
LA [auth Ag]Guanine nucleotide-binding protein subunit beta-like protein
MA [auth BA]60S ribosomal protein L2-A
D [auth 5]25S ribosomal RNA---
NA [auth BB]60S ribosomal protein L3
OA [auth BC]RPL4A isoform 1
PA [auth BD]RPL5 isoform 1
QA [auth BE]60S ribosomal protein L6-B
RA [auth BF]60S ribosomal protein L7-A
SA [auth BG]60S ribosomal protein L8-A
TA [auth BH]60S ribosomal protein L9-A
UA [auth BI]RPL10 isoform 1
VA [auth BJ]RPL11B isoform 1
WA [auth BK]60S ribosomal protein L13-A
E [auth 6]tRNA---
XA [auth BL]60S ribosomal protein L14-A
YA [auth BM]60S ribosomal protein L15-A
ZA [auth BN]60S ribosomal protein L16-A
AB [auth BO]60S ribosomal protein L17-A
BB [auth BP]60S ribosomal protein L18-A
CB [auth BQ]60S ribosomal protein L19-A
DB [auth BR]60S ribosomal protein L20-A
EB [auth BS]60S ribosomal protein L21-A
FB [auth BT]60S ribosomal protein L22-A
GB [auth BU]60S ribosomal protein L23-A
F [auth AA]40S ribosomal protein S0-A
HB [auth BV]RPL24A isoform 1
IB [auth BW]60S ribosomal protein L25
JB [auth BX]60S ribosomal protein L26-A
KB [auth BY]60S ribosomal protein L27-A
LB [auth BZ]60S ribosomal protein L28
MB [auth Ba]60S ribosomal protein L29
NB [auth Bb]60S ribosomal protein L30
OB [auth Bc]60S ribosomal protein L31-A
PB [auth Bd]RPL32 isoform 1
QB [auth Be]60S ribosomal protein L33-A
G [auth AB]40S ribosomal protein S1-A
RB [auth Bf]60S ribosomal protein L34-A
SB [auth Bg]60S ribosomal protein L35-A
TB [auth Bh]60S ribosomal protein L36-A
UB [auth Bi]60S ribosomal protein L37-A
VB [auth Bj]RPL38 isoform 1
WB [auth Bk]60S ribosomal protein L39
XB [auth Bl]60S ribosomal protein L40-A
YB [auth Bm]RPL41A isoform 1
ZB [auth Bn]60S ribosomal protein L42-A
AC [auth Bo]60S ribosomal protein L43-A
H [auth AC]RPS2 isoform 1
BC [auth CA]RQC trigger complex helicase SLH1
CC [auth CB]RQC trigger complex subunit CUE3
DC [auth CC]RQC trigger complex subunit RQT4
I [auth AD]RPS3 isoform 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth AE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
J [auth AE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
J [auth AE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
J [auth AE]IPR002942RNA-binding S4 domainDomain
J [auth AE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
J [auth AE]IPR000876Small ribosomal subunit protein eS4Family
J [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth AE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
J [auth AE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
J [auth AE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth AE]IPR005824KOWDomain
K [auth AF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
K [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
K [auth AF]IPR000235Small ribosomal subunit protein uS7Family
K [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
K [auth AF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
L [auth AG]IPR014401Small ribosomal subunit protein eS6-likeFamily
L [auth AG]IPR001377Small ribosomal subunit protein eS6Family
L [auth AG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
M [auth AH]IPR000554Small ribosomal subunit protein eS7Family
M [auth AH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
N [auth AI]IPR001047Small ribosomal subunit protein eS8Family
N [auth AI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
N [auth AI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
N [auth AI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
O [auth AJ]IPR002942RNA-binding S4 domainDomain
O [auth AJ]IPR022801Small ribosomal subunit protein uS4Family
O [auth AJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
O [auth AJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
O [auth AJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
O [auth AJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
P [auth AK]IPR037447Small ribosomal subunit protein eS10Family
P [auth AK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
P [auth AK]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
P [auth AK]IPR005326Plectin/eS10, N-terminalDomain
Q [auth AL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth AL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
Q [auth AL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth AL]IPR000266Small ribosomal subunit protein uS17Family
Q [auth AL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
R [auth AM]IPR000530Small ribosomal subunit protein eS12Family
R [auth AM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
R [auth AM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
R [auth AM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
S [auth AN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
S [auth AN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
S [auth AN]IPR000589Small ribosomal subunit protein uS15Family
S [auth AN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
T [auth AO]IPR001971Small ribosomal subunit protein uS11Family
T [auth AO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
T [auth AO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
U [auth AP]IPR002222Small ribosomal subunit protein uS19Family
U [auth AP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
U [auth AP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
U [auth AP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
V [auth AQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
V [auth AQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
V [auth AQ]IPR000754Small ribosomal subunit protein uS9Family
V [auth AQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
W [auth AR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
W [auth AR]IPR001210Small ribosomal subunit protein eS17Family
W [auth AR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
X [auth AS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
X [auth AS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
X [auth AS]IPR001892Small ribosomal subunit protein uS13Family
X [auth AS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
Y [auth AT]IPR001266Small ribosomal subunit protein eS19Family
Y [auth AT]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
Y [auth AT]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
Y [auth AT]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Z [auth AU]IPR001848Small ribosomal subunit protein uS10Family
Z [auth AU]IPR027486Small ribosomal subunit protein uS10 domainDomain
Z [auth AU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
Z [auth AU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
Z [auth AU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
AA [auth AV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
AA [auth AV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
AA [auth AV]IPR001931Small ribosomal subunit protein eS21Family
BA [auth AW]IPR000630Small ribosomal subunit protein uS8Family
BA [auth AW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
BA [auth AW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
CA [auth AX]IPR006032Small ribosomal subunit protein uS12Family
CA [auth AX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth AX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
DA [auth AY]IPR001976Small ribosomal subunit protein eS24Family
DA [auth AY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
DA [auth AY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
EA [auth AZ]IPR004977Small ribosomal subunit protein eS25Family
EA [auth AZ]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
FA [auth Aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
FA [auth Aa]IPR000892Small ribosomal subunit protein eS26Family
FA [auth Aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
GA [auth Ab]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
GA [auth Ab]IPR000592Small ribosomal subunit protein eS27Family
GA [auth Ab]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth Ac]IPR028626Ribosomal protein eS28 conserved siteConserved Site
HA [auth Ac]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
HA [auth Ac]IPR000289Small ribosomal subunit protein eS28Family
IA [auth Ad]IPR001209Small ribosomal subunit protein uS14Family
IA [auth Ad]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IA [auth Ad]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
IA [auth Ad]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
JA [auth Ae]IPR006846Small ribosomal subunit protein eS30Family
KA [auth Af]IPR019954Ubiquitin conserved siteConserved Site
KA [auth Af]IPR000626Ubiquitin-like domainDomain
KA [auth Af]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
KA [auth Af]IPR002906Small ribosomal subunit protein eS31Domain
KA [auth Af]IPR019956Ubiquitin domainDomain
KA [auth Af]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
KA [auth Af]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth Ag]IPR019775WD40 repeat, conserved siteConserved Site
LA [auth Ag]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
LA [auth Ag]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
LA [auth Ag]IPR045223Small ribosomal subunit protein RACK1-likeFamily
LA [auth Ag]IPR001680WD40 repeatRepeat
LA [auth Ag]IPR020472G-protein beta WD-40 repeatRepeat
MA [auth BA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth BA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth BA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth BA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth BA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth BA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth BA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth BA]IPR002171Large ribosomal subunit protein uL2Family
NA [auth BB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth BB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
NA [auth BB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
NA [auth BB]IPR000597Large ribosomal subunit protein uL3Family
NA [auth BB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
OA [auth BC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
OA [auth BC]IPR002136Large ribosomal subunit protein uL4Family
OA [auth BC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
OA [auth BC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
OA [auth BC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
PA [auth BD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
PA [auth BD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
QA [auth BE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
QA [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
QA [auth BE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
QA [auth BE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
QA [auth BE]IPR000915Large ribosomal subunit protein eL6Family
RA [auth BF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
RA [auth BF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
RA [auth BF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
RA [auth BF]IPR039699Large ribosomal subunit protein uL30Family
RA [auth BF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
RA [auth BF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
RA [auth BF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
SA [auth BG]IPR001921Large ribosomal subunit protein eL8Family
SA [auth BG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
SA [auth BG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
SA [auth BG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
SA [auth BG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
TA [auth BH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
TA [auth BH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
TA [auth BH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
TA [auth BH]IPR000702Large ribosomal subunit protein uL6-likeFamily
UA [auth BI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
UA [auth BI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
UA [auth BI]IPR016180Large ribosomal subunit protein uL16 domainDomain
UA [auth BI]IPR047873Large ribosomal subunit protein uL16Family
UA [auth BI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
VA [auth BJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
VA [auth BJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
VA [auth BJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
VA [auth BJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
VA [auth BJ]IPR002132Large ribosomal subunit protein uL5Family
WA [auth BK]IPR001380Large ribosomal subunit protein eL13Family
WA [auth BK]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
XA [auth BL]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
XA [auth BL]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth BL]IPR039660Large ribosomal subunit protein eL14Family
XA [auth BL]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
XA [auth BL]IPR002784Large ribosomal subunit protein eL14 domainDomain
XA [auth BL]IPR005824KOWDomain
YA [auth BM]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
YA [auth BM]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
YA [auth BM]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
YA [auth BM]IPR000439Large ribosomal subunit protein eL15Family
ZA [auth BN]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
ZA [auth BN]IPR005822Large ribosomal subunit protein uL13Family
ZA [auth BN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
ZA [auth BN]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
AB [auth BO]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
AB [auth BO]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
AB [auth BO]IPR001063Large ribosomal subunit protein uL22Family
AB [auth BO]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
BB [auth BP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
BB [auth BP]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
BB [auth BP]IPR000039Large ribosomal subunit protein eL18Family
BB [auth BP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
CB [auth BQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
CB [auth BQ]IPR039547Large ribosomal subunit protein eL19Family
CB [auth BQ]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
CB [auth BQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
CB [auth BQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
CB [auth BQ]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
DB [auth BR]IPR028877Large ribosomal subunit protein eL20Family
DB [auth BR]IPR023573Large ribosomal subunit protein eL20 domainDomain
DB [auth BR]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
EB [auth BS]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
EB [auth BS]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
EB [auth BS]IPR001147Large ribosomal subunit protein eL21Family
EB [auth BS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth BT]IPR002671Large ribosomal subunit protein eL22Family
FB [auth BT]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
GB [auth BU]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
GB [auth BU]IPR000218Large ribosomal subunit protein uL14Family
GB [auth BU]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
F [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
F [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
F [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
F [auth AA]IPR001865Small ribosomal subunit protein uS2Family
F [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
HB [auth BV]IPR000988Large ribosomal subunit protein eL24-relatedFamily
HB [auth BV]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
HB [auth BV]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
IB [auth BW]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IB [auth BW]IPR013025Large ribosomal subunit protein uL23-likeFamily
IB [auth BW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IB [auth BW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IB [auth BW]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
JB [auth BX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
JB [auth BX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
JB [auth BX]IPR005824KOWDomain
JB [auth BX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JB [auth BX]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
JB [auth BX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
KB [auth BY]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
KB [auth BY]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
KB [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth BY]IPR001141Large ribosomal subunit protein eL27Family
KB [auth BY]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
LB [auth BZ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
LB [auth BZ]IPR030878Large ribosomal subunit protein uL15Family
LB [auth BZ]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
LB [auth BZ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
MB [auth Ba]IPR002673Large ribosomal subunit protein eL29Family
NB [auth Bb]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
NB [auth Bb]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
NB [auth Bb]IPR039109Large ribosomal subunit protein eL30-likeFamily
NB [auth Bb]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
OB [auth Bc]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
OB [auth Bc]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OB [auth Bc]IPR000054Large ribosomal subunit protein eL31Family
PB [auth Bd]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
PB [auth Bd]IPR001515Large ribosomal subunit protein eL32Family
PB [auth Bd]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
QB [auth Be]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
QB [auth Be]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QB [auth Be]IPR001780Large ribosomal subunit protein eL33Family
QB [auth Be]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
G [auth AB]IPR001593Small ribosomal subunit protein eS1Family
G [auth AB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
G [auth AB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
RB [auth Bf]IPR008195Large ribosomal subunit protein eL34Family
RB [auth Bf]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
SB [auth Bg]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
SB [auth Bg]IPR001854Large ribosomal subunit protein uL29Family
SB [auth Bg]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
SB [auth Bg]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
TB [auth Bh]IPR000509Large ribosomal subunit protein eL36Family
TB [auth Bh]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
UB [auth Bi]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UB [auth Bi]IPR001569Large ribosomal subunit protein eL37Family
UB [auth Bi]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
UB [auth Bi]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
VB [auth Bj]IPR002675Large ribosomal subunit protein eL38Family
VB [auth Bj]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
WB [auth Bk]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
WB [auth Bk]IPR000077Large ribosomal subunit protein eL39Family
WB [auth Bk]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
XB [auth Bl]IPR019954Ubiquitin conserved siteConserved Site
XB [auth Bl]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
XB [auth Bl]IPR000626Ubiquitin-like domainDomain
XB [auth Bl]IPR019956Ubiquitin domainDomain
XB [auth Bl]IPR001975Large ribosomal subunit protein eL40 domainDomain
XB [auth Bl]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
YB [auth Bm]IPR007836Large ribosomal subunit protein eS32Family
ZB [auth Bn]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth Bn]IPR000552Large ribosomal subunit protein eL42Family
AC [auth Bo]IPR002674Large ribosomal subunit protein eL43Family
AC [auth Bo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Bo]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
H [auth AC]IPR000851Small ribosomal subunit protein uS5Family
H [auth AC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
H [auth AC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
H [auth AC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
H [auth AC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth AC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
H [auth AC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
BC [auth CA]IPR001650Helicase, C-terminal domain-likeDomain
BC [auth CA]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BC [auth CA]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
BC [auth CA]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
BC [auth CA]IPR004179Sec63 domainDomain
BC [auth CA]IPR035892C2 domain superfamilyHomologous Superfamily
BC [auth CA]IPR003593AAA+ ATPase domainDomain
BC [auth CA]IPR011545DEAD/DEAH box helicase domainDomain
BC [auth CA]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
CC [auth CB]IPR041808CUE domain-containing protein 3, CUE domainDomain
CC [auth CB]IPR003892Ubiquitin system component CUEDomain
DC [auth CC]IPR009349TRIP4/RQT4, C2HC5-type zinc fingerDomain
DC [auth CC]IPR039128Activating signal cointegrator 1-likeFamily
I [auth AD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
I [auth AD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
I [auth AD]IPR004044K Homology domain, type 2Domain
I [auth AD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
I [auth AD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
I [auth AD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
I [auth AD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site