Annotations: 7ZNJ

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
F [auth a]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
F [auth a]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
K [auth F]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
K [auth F]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
P [auth f]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
P [auth f]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
U [auth K]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
U [auth K]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
Z [auth k]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042951	3002019	SCOP2B (2022-06-29)
Z [auth k]	SCOP2B Superfamily	RecA-like P-loop NTPases	8042950	3002019	SCOP2B (2022-06-29)
AA [auth l]	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
G [auth b]	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
L [auth G]	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
Q [auth g]	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
V [auth L]	SCOP2B Superfamily	Mago nashi protein	8042952	3000634	SCOP2B (2022-06-29)
BA [auth m]	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
H [auth c]	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
M [auth H]	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
R [auth h]	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
W [auth M]	SCOP2B Superfamily	RNA-binding domain RBD	8042953	3000110	SCOP2B (2022-06-29)
CA [auth n]	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)
I [auth d]	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)
N [auth I]	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)
S [auth i]	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)
X [auth N]	SCOP2B Superfamily	RNA-binding domain RBD	8064925	3000110	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00270	e7znjA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
A	PF00271	e7znjA2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
F [auth a]	PF00270	e7znja2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
F [auth a]	PF00271	e7znja1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
K [auth F]	PF00270	e7znjF2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
K [auth F]	PF00271	e7znjF1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
P [auth f]	PF00270	e7znjf1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
P [auth f]	PF00271	e7znjf2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
U [auth K]	PF00270	e7znjK1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
U [auth K]	PF00271	e7znjK2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
Z [auth k]	PF00270	e7znjk2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00270	ECOD (1.6)
Z [auth k]	PF00271	e7znjk1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00271	ECOD (1.6)
AA [auth l]	PF02792	e7znjl1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
B	PF02792	e7znjB1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
G [auth b]	PF02792	e7znjb1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
L [auth G]	PF02792	e7znjG1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
Q [auth g]	PF02792	e7znjg1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
V [auth L]	PF02792	e7znjL1	A: a+b two layers	X: Mago nashi protein (From Topology)	H: Mago nashi protein (From Topology)	T: Mago nashi protein	F: PF02792	ECOD (1.6)
BA [auth m]	PF00076	e7znjm1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
C	PF00076	e7znjC1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
H [auth c]	PF00076	e7znjc1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
M [auth H]	PF00076	e7znjH1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
R [auth h]	PF00076	e7znjh1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
W [auth M]	PF00076	e7znjM1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
CA [auth n]	PF00076	e7znjn1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
D	PF00076	e7znjD1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
I [auth d]	PF00076	e7znjd1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
N [auth I]	PF00076	e7znjI1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
S [auth i]	PF00076	e7znji1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)
X [auth N]	PF00076	e7znjN1	A: a+b two layers	X: Alpha-beta plaits	H: RNA-binding domain, RBD (From Topology)	T: RNA-binding domain, RBD	F: PF00076	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	PF00270	DEAD/DEAH box helicase (DEAD)	DEAD/DEAH box helicase	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...	Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.	Domain
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	PF00271	Helicase conserved C-terminal domain (Helicase_C)	Helicase conserved C-terminal domain	The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.	Domain
AA [auth l], B, G [auth b], L [auth G], Q [auth g], AA [auth l], B, G [auth b], L [auth G], Q [auth g], V [auth L]	PF02792	Mago nashi protein (Mago_nashi)	Mago nashi protein	-	Family
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	Eukaryotic initiation factor 4A-III, N-terminally processed	selenocysteine insertion sequence binding RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding ribonucleoprotein complex binding protein-containing complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding selenocysteine insertion sequence binding RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding ribonucleoprotein complex binding protein-containing complex binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding poly(A) binding poly-purine tract binding single-stranded RNA binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity RNA helicase activity ATP-dependent activity, acting on RNA RNA stem-loop binding	regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of cellular process cellular biosynthetic process organonitrogen compound biosynthetic process negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation organic substance metabolic process organic substance biosynthetic process negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process organonitrogen compound metabolic process cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular metabolic process primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process behavior multicellular organismal process exploration behavior modulation of chemical synaptic transmission signaling regulation of translation at synapse, modulating synaptic transmission cell communication synaptic signaling postsynaptic modulation of chemical synaptic transmission trans-synaptic signaling regulation of signaling cell-cell signaling regulation of translation at postsynapse regulation of translation at synapse chemical synaptic transmission regulation of translation at postsynapse, modulating synaptic transmission regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication cellular response to endogenous stimulus cellular response to growth factor stimulus response to stimulus response to endogenous stimulus cellular response to nerve growth factor stimulus cellular response to brain-derived neurotrophic factor stimulus response to nerve growth factor response to growth factor cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport organic substance transport nucleic acid transport intracellular transport establishment of localization RNA export from nucleus establishment of RNA localization macromolecule localization developmental process embryonic organ morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis animal organ development embryo development multicellular organism development anatomical structure morphogenesis embryo development ending in birth or egg hatching skeletal system development anatomical structure development cranial skeletal system development animal organ morphogenesis embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis system development ribonucleoprotein complex biogenesis RNA metabolic process rRNA processing nucleobase-containing compound metabolic process cellular component biogenesis ribosome biogenesis cellular component organization or biogenesis RNA processing rRNA metabolic process nucleic acid metabolic process organic cyclic compound metabolic process nucleic acid catabolic process regulation of translational elongation translational readthrough negative regulation of translational elongation selenocysteine incorporation regulation of selenocysteine incorporation negative regulation of selenocysteine incorporation translational elongation positive regulation of protein metabolic process positive regulation of biological process positive regulation of translation positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of gene expression positive regulation of cellular biosynthetic process RNA splicing mRNA processing mRNA metabolic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile nuclear-transcribed mRNA catabolic process, nonsense-mediated decay regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process RNA catabolic process mRNA catabolic process nucleobase-containing compound catabolic process catabolic process macromolecule catabolic process regulation of mRNA catabolic process nuclear-transcribed mRNA catabolic process regulation of catabolic process organic cyclic compound catabolic process regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay regulation of mRNA metabolic process organic substance catabolic process system process learning learning or memory nervous system process cognition associative learning cellular response to stimulus regulation of postsynaptic membrane potential regulation of system process regulation of signal transduction chemical synaptic transmission, postsynaptic modulation of excitatory postsynaptic potential regulation of multicellular organismal process signal transduction regulation of biological quality cell surface receptor signaling pathway regulation of nervous system process regulation of response to stimulus negative regulation of excitatory postsynaptic potential excitatory postsynaptic potential regulation of membrane potential response to organic substance response to chemical response to organic cyclic compound cellular response to inorganic substance cellular response to chemical stimulus response to selenite ion cellular response to selenite ion response to inorganic substance	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane nuclear speck nuclear body nucleoplasm U2-type spliceosomal complex protein-containing complex catalytic complex nuclear protein-containing complex U2-type catalytic step 1 spliceosome spliceosomal complex ribonucleoprotein complex catalytic step 1 spliceosome catalytic step 2 spliceosome cytoplasm cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection synapse cell junction glutamatergic synapse exon-exon junction complex cell body neuronal cell body postsynapse
AA [auth l], B, G [auth b], L [auth G], Q [auth g], AA [auth l], B, G [auth b], L [auth G], Q [auth g], V [auth L]	Protein mago nashi homolog	RNA binding binding organic cyclic compound binding nucleic acid binding	RNA splicing cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process RNA splicing cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process mRNA processing mRNA metabolic process RNA splicing, via transesterification reactions mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport organic substance transport nucleic acid transport intracellular transport establishment of localization RNA export from nucleus establishment of RNA localization macromolecule localization regulation of cellular process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay negative regulation of biological process negative regulation of cellular metabolic process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process RNA catabolic process mRNA catabolic process regulation of biological process negative regulation of metabolic process regulation of cellular metabolic process negative regulation of cellular biosynthetic process nucleobase-containing compound catabolic process regulation of gene expression negative regulation of gene expression negative regulation of macromolecule biosynthetic process nucleic acid catabolic process regulation of macromolecule biosynthetic process regulation of metabolic process catabolic process macromolecule catabolic process regulation of mRNA catabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process nuclear-transcribed mRNA catabolic process biological regulation regulation of macromolecule metabolic process regulation of catabolic process organic cyclic compound catabolic process regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay regulation of cellular biosynthetic process negative regulation of biosynthetic process regulation of mRNA metabolic process organic substance catabolic process alternative mRNA splicing, via spliceosome regulation of mRNA splicing, via spliceosome regulation of mRNA processing regulation of RNA splicing regulation of alternative mRNA splicing, via spliceosome organonitrogen compound biosynthetic process post-transcriptional regulation of gene expression protein metabolic process organonitrogen compound metabolic process regulation of protein metabolic process translation regulation of translation	membrane-bounded organelle exon-exon junction subcomplex mago-y14 protein-containing complex intracellular anatomical structure nucleus exon-exon junction complex nuclear protein-containing complex ATPase inhibitor complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle membrane-enclosed lumen intracellular organelle lumen membrane-bounded organelle exon-exon junction subcomplex mago-y14 protein-containing complex intracellular anatomical structure nucleus exon-exon junction complex nuclear protein-containing complex ATPase inhibitor complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle membrane-enclosed lumen intracellular organelle lumen nuclear speck nuclear body nucleoplasm organelle lumen nuclear lumen catalytic step 2 spliceosome catalytic complex spliceosomal complex ribonucleoprotein complex cytoplasm cytosol
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	RNA-binding protein 8A	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding	cellular localization nitrogen compound transport nucleocytoplasmic transport transport cellular biosynthetic process nuclear transport mRNA transport localization organic substance metabolic process mRNA export from nucleus establishment of localization in cell organic substance biosynthetic process RNA localization nuclear export cellular localization nitrogen compound transport nucleocytoplasmic transport transport cellular biosynthetic process nuclear transport mRNA transport localization organic substance metabolic process mRNA export from nucleus establishment of localization in cell organic substance biosynthetic process RNA localization nuclear export nucleobase-containing compound transport RNA transport organic substance transport cellular metabolic process nucleic acid transport intracellular transport gene expression establishment of localization macromolecule biosynthetic process RNA export from nucleus establishment of RNA localization biosynthetic process macromolecule localization cellular process metabolic process macromolecule metabolic process regulation of cellular process alternative mRNA splicing, via spliceosome RNA metabolic process regulation of mRNA splicing, via spliceosome mRNA processing regulation of primary metabolic process nucleobase-containing compound metabolic process regulation of RNA metabolic process RNA processing regulation of nucleobase-containing compound metabolic process regulation of biosynthetic process regulation of mRNA processing RNA splicing regulation of biological process biological regulation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process regulation of RNA splicing mRNA metabolic process nucleic acid metabolic process regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression RNA splicing, via transesterification reactions regulation of alternative mRNA splicing, via spliceosome mRNA splicing, via spliceosome RNA splicing, via transesterification reactions with bulged adenosine as nucleophile regulation of macromolecule biosynthetic process regulation of mRNA metabolic process regulation of metabolic process organonitrogen compound biosynthetic process post-transcriptional regulation of gene expression protein metabolic process organonitrogen compound metabolic process regulation of protein metabolic process translation regulation of translation nuclear-transcribed mRNA catabolic process, nonsense-mediated decay negative regulation of biological process negative regulation of cellular metabolic process RNA catabolic process mRNA catabolic process negative regulation of metabolic process negative regulation of cellular biosynthetic process nucleobase-containing compound catabolic process negative regulation of gene expression negative regulation of macromolecule biosynthetic process nucleic acid catabolic process catabolic process macromolecule catabolic process regulation of mRNA catabolic process negative regulation of cellular process negative regulation of macromolecule metabolic process nuclear-transcribed mRNA catabolic process regulation of catabolic process organic cyclic compound catabolic process regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay negative regulation of biosynthetic process organic substance catabolic process	membrane-bounded organelle exon-exon junction subcomplex mago-y14 protein-containing complex intracellular anatomical structure nucleus exon-exon junction complex nuclear protein-containing complex ATPase inhibitor complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle membrane-enclosed lumen intracellular organelle lumen membrane-bounded organelle exon-exon junction subcomplex mago-y14 protein-containing complex intracellular anatomical structure nucleus exon-exon junction complex nuclear protein-containing complex ATPase inhibitor complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle organelle membrane-enclosed lumen intracellular organelle lumen nuclear speck nuclear body nucleoplasm organelle lumen nuclear lumen U2-type spliceosomal complex catalytic complex U2-type catalytic step 1 spliceosome spliceosomal complex ribonucleoprotein complex catalytic step 1 spliceosome catalytic step 2 spliceosome cytoplasm cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection cell body neuronal cell body
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	Maltose/maltodextrin-binding periplasmic protein,THO complex subunit 4	RNA binding binding organic cyclic compound binding nucleic acid binding mRNA binding protein-RNA adaptor activity protein-macromolecule adaptor activity C5-methylcytidine-containing RNA reader activity molecular adaptor activity transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity	RNA splicing cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process RNA splicing cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process developmental process multicellular organismal process cellular developmental process ossification cell differentiation osteoblast differentiation cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport mRNA transport localization mRNA export from nucleus establishment of localization in cell RNA localization nuclear export nucleobase-containing compound transport RNA transport organic substance transport nucleic acid transport intracellular transport establishment of localization RNA export from nucleus establishment of RNA localization macromolecule localization mRNA processing mRNA metabolic process	membrane cellular anatomical entity membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck nuclear body intracellular organelle nucleoplasm organelle lumen organelle membrane cellular anatomical entity membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nuclear speck nuclear body intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen catalytic step 2 spliceosome protein-containing complex catalytic complex nuclear protein-containing complex spliceosomal complex ribonucleoprotein complex extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytoplasm cytosol transcription export complex outer membrane-bounded periplasmic space cell envelope periplasmic space
DA [auth o], E, J [auth e], O [auth J], T [auth j], DA [auth o], E, J [auth e], O [auth J], T [auth j], Y [auth O]	RNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	Conserved Site
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR014014	RNA helicase, DEAD-box type, Q motif	Domain
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR011545	DEAD/DEAH box helicase domain	Domain
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR001650	Helicase, C-terminal domain-like	Domain
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
AA [auth l], B, G [auth b], L [auth G], Q [auth g], AA [auth l], B, G [auth b], L [auth G], Q [auth g], V [auth L]	IPR004023	Mago nashi protein	Family
AA [auth l], B, G [auth b], L [auth G], Q [auth g], AA [auth l], B, G [auth b], L [auth G], Q [auth g], V [auth L]	IPR036605	Mago nashi superfamily	Homologous Superfamily
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	IPR033744	RBM8, RNA recognition motif	Domain
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	IPR000504	RNA recognition motif domain	Domain
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	IPR008111	RNA-binding motif protein 8	Family
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR000504	RNA recognition motif domain	Domain
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR025715	Chromatin target of PRMT1 protein, C-terminal	Domain
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR006059	Bacterial-type extracellular solute-binding protein	Family
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	IPR006061	Solute-binding family 1, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, F [auth a], K [auth F], P [auth f], U [auth K], A, F [auth a], K [auth F], P [auth f], U [auth K], Z [auth k]	Pharos: P38919	Richieri Costa-Pereira syndrome psoriasis adrenal cortex carcinoma glioblastoma large cell medulloblastoma ovarian cancer astrocytic tumor intellectual disability lung cancer diabetes mellitus invasive ductal breast carcinoma medulloblastoma
AA [auth l], B, G [auth b], L [auth G], Q [auth g], AA [auth l], B, G [auth b], L [auth G], Q [auth g], V [auth L]	Pharos: P61326	lymphoplasmacytic lymphoma plasma cell myeloma medulloblastoma ovarian cancer
BA [auth m], C, H [auth c], M [auth H], R [auth h], BA [auth m], C, H [auth c], M [auth H], R [auth h], W [auth M]	Pharos: Q9Y5S9	thrombocytopenia-absent radius syndrome astrocytic tumor Cytopenia interstitial cystitis malignant mesothelioma ovarian cancer psoriasis tuberculosis breast cancer glioblastoma large cell medulloblastoma medulloblastoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia congenital anemia intellectual disability thrombocytopenia-absent radius syndrome astrocytic tumor Cytopenia interstitial cystitis malignant mesothelioma ovarian cancer psoriasis tuberculosis breast cancer glioblastoma large cell medulloblastoma medulloblastoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia congenital anemia intellectual disability lung cancer myopathy primitive neuroectodermal tumor
CA [auth n], D, I [auth d], N [auth I], S [auth i], CA [auth n], D, I [auth d], N [auth I], S [auth i], X [auth N]	Pharos: Q86V81	HIV infectious disease atopic eczema HIV Coinfection large cell medulloblastoma malignant pancreatic neoplasm non-small cell lung carcinoma pancreatic ductal adenocarcinoma breast cancer malignant ependymoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm glioblastoma invasive ductal breast carcinoma malignant glioma HIV infectious disease atopic eczema HIV Coinfection large cell medulloblastoma malignant pancreatic neoplasm non-small cell lung carcinoma pancreatic ductal adenocarcinoma breast cancer malignant ependymoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm glioblastoma invasive ductal breast carcinoma malignant glioma nasopharyngeal carcinoma ovarian cancer