7ZN7 | pdb_00007zn7

Cryo-EM structure of RCMV-E E27 bound to human DDB1 (deltaBPB) and rat STAT2 CCD


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like 8051194 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWD40 repeat-like 8052530 3001694 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth D]STAT_alphae7zn7D1 A: alpha bundlesX: STAT-likeH: STAT (From Topology)T: STATF: STAT_alphaECOD (1.6)
ACPSF_A_Ne7zn7A3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: CPSF_A_NECOD (1.6)
AMMS1_N_Ne7zn7A2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_N_NECOD (1.6)
ACPSF_A_Ce7zn7A1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: CPSF_A_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.130.10.10 Mainly Beta 7 Propeller Methylamine Dehydrogenase Chain HCATH (utative)
A1.10.150.910 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth D]PF01017STAT transcription factor, coiled-coil domain (STAT_alpha)STAT transcription factor, coiled-coil domainSTAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. STATs share 6 structurally and ...STAT proteins (Signal Transducers and Activators of Transcription) are a family of transcription factors that are specifically activated to regulate gene transcription when cells encounter cytokines and growth factors. STATs share 6 structurally and functionally conserved domains including: an N-terminal domain (ND) that strengthens interactions between STAT dimers on adjacent DNA-binding sites; a coiled-coil STAT domain (CCD) that is implicated in protein-protein interactions; a DNA-binding domain (DBD) with an immunoglobulin-like fold similar to p53 tumour suppressor protein; an EF-hand-like linker domain connecting the DNA-binding and SH2 domains; an SH2 domain that acts as a phosphorylation-dependent switch to control receptor recognition and DNA-binding; and a C-terminal transactivation domain. This entry represents the coiled-coil domain (CCD)
Domain
PF05999Herpesvirus U5-like family (Herpes_U5)Herpesvirus U5-like family- Family
PF10433RSE1/DDB1/CPSF1 first beta-propeller (Beta-prop_RSE1_1st)RSE1/DDB1/CPSF1 first beta-propeller- Repeat
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]Signal transducer and activator of transcription
B27a- - -
DNA damage-binding protein 1