7ZDM | pdb_00007zdm

Complex I from Ovis aries at pH5.5, Closed state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
X [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8047670 3002280 SCOP2B (2022-06-29)
X [auth N]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054160 3002280 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8048501 3002280 SCOP2B (2022-06-29)
W [auth M]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054155 3002280 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8048258 3002280 SCOP2B (2022-06-29)
V [auth L]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8047664 3002280 SCOP2B (2022-06-29)
U [auth K]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8053514 3002200 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8053518 3002200 SCOP2B (2022-06-29)
B [auth 2]SCOP2B SuperfamilyThioredoxin-like 8100908 3000031 SCOP2B (2022-06-29)
S [auth H]SCOP2B SuperfamilyAntiporter subunits half-channel-like 8054146 3002280 SCOP2B (2022-06-29)
R [auth A]SCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8106704 3002200 SCOP2B (2022-06-29)
J [auth c]SCOP2B SuperfamilyNADH-ubiquinone oxidoreductase-like 8053980 3002258 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth b]zf-CHCCe7zdmb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: zf-CHCCECOD (1.6)
G [auth 9]Fer4_21_1e7zdm91 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
F [auth 6]Oxidored_q6e7zdm61 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: Oxidored_q6ECOD (1.6)
E [auth 5]Complex1_30kDae7zdm51 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: Complex1_30kDaECOD (1.6)
SA [auth z]MWFEe7zdmz1 A: extended segmentsX: Mitochondrial complex I, MWFE subunit (From Topology)H: Mitochondrial complex I, MWFE subunit (From Topology)T: Mitochondrial complex I, MWFE subunitF: MWFEECOD (1.6)
RA [auth y]NADH_oxidorede7zdmy1 A: extended segmentsX: Mitochondrial complex I, MNLL subunit (From Topology)H: Mitochondrial complex I, MNLL subunit (From Topology)T: Mitochondrial complex I, MNLL subunitF: NADH_oxidoredECOD (1.6)
QA [auth x]NADH_dh_m_C1e7zdmx1 A: extended segmentsX: Mitochondrial complex I, KFYI subunit (From Topology)H: Mitochondrial complex I, KFYI subunit (From Topology)T: Mitochondrial complex I, KFYI subunitF: NADH_dh_m_C1ECOD (1.6)
NA [auth u]NADH_B2e7zdmu1 A: extended segmentsX: Mitochondrial complex I, AGGG subunit (From Topology)H: Mitochondrial complex I, AGGG subunit (From Topology)T: Mitochondrial complex I, AGGG subunitF: NADH_B2ECOD (1.6)
MA [auth t]Complex1_LYRe7zdmt1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: Complex1_LYRECOD (1.6)
JA [auth q]GRIM-19e7zdmq1 A: extended segmentsX: Mitochondrial complex I, B16.6 subunit (From Topology)H: Mitochondrial complex I, B16.6 subunit (From Topology)T: Mitochondrial complex I, B16.6 subunitF: GRIM-19ECOD (1.6)
HA [auth o]NDUF_C2e7zdmo1 A: extended segmentsX: Mitochondrial complex I, B14.5b subunit (From Topology)H: Mitochondrial complex I, B14.5b subunit (From Topology)T: Mitochondrial complex I, B14.5b subunitF: NDUF_C2ECOD (1.6)
FA [auth m]NADHdh_A3e7zdmm1 A: extended segmentsX: Mitochondrial complex I, B9 subunit (From Topology)H: Mitochondrial complex I, B9 subunit (From Topology)T: Mitochondrial complex I, B9 subunitF: NADHdh_A3ECOD (1.6)
EA [auth l]Ndufs5e7zdml1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: CHCH domain (From Topology)T: CHCH domainF: Ndufs5ECOD (1.6)
C [auth 3]PRK09129e7zdm31 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PRK09129ECOD (1.6)
C [auth 3]Fer2_4e7zdm33 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2_4ECOD (1.6)
C [auth 3]Molybdop_Fe4S4_1e7zdm34 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: Molybdop_Fe4S4_1ECOD (1.6)
C [auth 3]Molybdopterin_2nde7zdm36 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_2ndECOD (1.6)
C [auth 3]Molybdopterin_1ste7zdm35 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: Molybdopterin_1stECOD (1.6)
C [auth 3]NADH-G_4Fe-4S_3e7zdm32 A: extended segmentsX: iron-sulfur center-binding helical hairpin (From Topology)H: iron-sulfur center-binding helical hairpin (From Topology)T: iron-sulfur center-binding helical hairpinF: NADH-G_4Fe-4S_3ECOD (1.6)
DA [auth k]dNK_2e7zdmk1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: dNK_2ECOD (1.6)
CA [auth Z]NDUFB10e7zdmZ1 A: alpha bundlesX: Mitochondrial complex I, PDSW subunit (From Topology)H: Mitochondrial complex I, PDSW subunit (From Topology)T: Mitochondrial complex I, PDSW subunitF: NDUFB10ECOD (1.6)
BA [auth Y]CHCHe7zdmY1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: CHCHECOD (1.6)
Z [auth W]NDUF_B5e7zdmW1 A: extended segmentsX: Mitochondrial complex I, SGDH subunit (From Topology)H: Mitochondrial complex I, SGDH subunit (From Topology)T: Mitochondrial complex I, SGDH subunitF: NDUF_B5ECOD (1.6)
X [auth N]Proton_antipo_Me7zdmN1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
W [auth M]Proton_antipo_Me7zdmM1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
V [auth L]Proton_antipo_Me7zdmL1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
U [auth K]Oxidored_q2e7zdmK1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: Oxidored_q2ECOD (1.6)
T [auth J]Oxidored_q3_1e7zdmJ1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: Oxidored_q3_1ECOD (1.6)
B [auth 2]2Fe-2S_thioredx_Ne7zdm21 A: alpha bundlesX: NQO2 helical bundle domain (From Topology)H: NQO2 helical bundle domain (From Topology)T: NQO2 helical bundle domainF: 2Fe-2S_thioredx_NECOD (1.6)
B [auth 2]2Fe-2S_thioredx_Ce7zdm22 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: 2Fe-2S_thioredx_CECOD (1.6)
S [auth H]NADHdhe7zdmH1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: NADHdhECOD (1.6)
R [auth A]Oxidored_q4e7zdmA1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: Oxidored_q4ECOD (1.6)
AA [auth X]PP-bindinge7zdmX1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PP-bindingECOD (1.6)
Q [auth j]PP-bindinge7zdmj1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PP-bindingECOD (1.6)
P [auth i]NDUFA12e7zdmi1 A: a+b three layersX: Mitochondrial complex I, B17.2 subunit (From Topology)H: Mitochondrial complex I, B17.2 subunit (From Topology)T: Mitochondrial complex I, B17.2 subunitF: NDUFA12ECOD (1.6)
N [auth g]Complex1_LYRe7zdmg1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: Complex1_LYRECOD (1.6)
M [auth f]ETC_C1_NDUFA5e7zdmf1 A: extended segmentsX: FATC domain (From Topology)H: FATC domain (From Topology)T: FATC domainF: ETC_C1_NDUFA5ECOD (1.6)
L [auth e]L51_S25_CI-B8e7zdme1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
K [auth d]NAD_binding_10e7zdmd1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: NAD_binding_10ECOD (1.6)
J [auth c]ETC_C1_NDUFA4e7zdmc1 A: a+b two layersX: Putative oxidoreductase (From Topology)H: Putative oxidoreductase (From Topology)T: Putative oxidoreductaseF: ETC_C1_NDUFA4ECOD (1.6)
A [auth 1]NADH_4Fe-4Se7zdm11 A: alpha bundlesX: Bromodomain-likeH: Nqo1C-terminal domain-like (From Topology)T: Nqo1C-terminal domain-likeF: NADH_4Fe-4SECOD (1.6)
A [auth 1]SLBBe7zdm13 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Nqo1 middle domain-likeF: SLBBECOD (1.6)
A [auth 1]Complex1_51Ke7zdm12 A: a/b three-layered sandwichesX: Nqo1 FMN-binding domain-like (From Topology)H: Nqo1 FMN-binding domain-like (From Topology)T: Nqo1 FMN-binding domain-likeF: Complex1_51KECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth 5]PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunitDomain
C [auth 3]PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductaseDomain
C [auth 3]PF22151NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain (Fer4_NDSU1)NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domainThis entry represents the 4Fe-4S domain of NADH-ubiquinone oxidoreductase NDUFS1 from mammals and NuoG from bacteria, which are part of respiratory chain complex I [1-5]. Domain
C [auth 3]PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
C [auth 3]PF22117NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain (Fer4_Nqo3)NADH-quinone oxidoreductase subunit 3, ferredoxin-like domainNADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contain ...NADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contains Fe4-S4 cluster, one of the redox centers of the complex [1-5].
Domain
C [auth 3]PF09326NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)NADH-ubiquinone oxidoreductase subunit G, C-terminal- Family
C [auth 3]PF10588NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)NADH-ubiquinone oxidoreductase-G iron-sulfur binding regionDomain
X [auth N]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
X [auth N]PF06444NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C)NADH dehydrogenase subunit 2 C-terminusThis family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with Pfam:PF00361. Domain
W [auth M]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
W [auth M]PF01059NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N)NADH-ubiquinone oxidoreductase chain 4, amino terminusThis domain is found at the N-terminal end of NADH-ubiquinone oxidoreductase chain 4 and similar sequences from bacteria and eukaryotes. This domain is found upstream of Pfam:PF00361 and shows an all-alpha structure. Domain
V [auth L]PF00361NADH:quinone oxidoreductase/Mrp antiporter, TM (Proton_antipo_M)NADH:quinone oxidoreductase/Mrp antiporter, TMThis entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associa ...This entry includes membrane transporters and represents some 7 of potentially 14-16 TM regions. In many instances, its members forms part of complex I that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N [1]. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction [2].
Domain
V [auth L]PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminusThis entry represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with Pfam:PF00361 and Pfam:PF00662. Domain
V [auth L]PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminusThis entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in ...This entry represents an amino terminal extension of Pfam:PF00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Domain
U [auth K]PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
T [auth J]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
T [auth J]PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
B [auth 2]PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
S [auth H]PF07347NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) (CI-B14_5a)NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a)- Family
S [auth H]PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
R [auth A]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
AA [auth X],
Q [auth j]
PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
A [auth 1]PF22461SLBB domain (SLBB_2)SLBB domainThis entry represents a set of SLBB domains [5]. Domain
A [auth 1]PF01512Nuo51 FMN-binding domain (Complex1_51K)Nuo51 FMN-binding domainThis entry represents the FMN-binding domain of NADH-ubiquinone oxidoreductase 51kDa subunit from NADH:ubiquinone oxidoreductase. Domain
A [auth 1]PF10589NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)NADH-ubiquinone oxidoreductase-F iron-sulfur binding regionDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth b]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-
H [auth a]Complex I-9kD-
G [auth 9]Complex I-23kD
F [auth 6]Complex I-20kD
E [auth 5]NADH:ubiquinone oxidoreductase core subunit S3 -
SA [auth z]Complex I-MWFE- -
RA [auth y]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1- -
QA [auth x]NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial- -
PA [auth w]Mitochondrial complex I, ESSS subunit- -
OA [auth v]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-
D [auth 4]Complex I-49kD
NA [auth u]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-
MA [auth t]NADH:ubiquinone oxidoreductase subunit B9-
LA [auth s]NADH:ubiquinone oxidoreductase subunit B7 -
KA [auth r]Mitochondrial complex I, B17 subunit-
JA [auth q]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13- -
IA [auth p]NADH:ubiquinone oxidoreductase subunit B4- -
HA [auth o]NADH dehydrogenase [ubiquinone] 1 subunit C2-
GA [auth n]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-
FA [auth m]NADH:ubiquinone oxidoreductase subunit A3- -
EA [auth l]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5
C [auth 3]NADH:ubiquinone oxidoreductase core subunit S1
DA [auth k]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-
CA [auth Z]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10- -
BA [auth Y]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
Z [auth W]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial- -
Y [auth V]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-
X [auth N]NADH-ubiquinone oxidoreductase chain 2
W [auth M]NADH-ubiquinone oxidoreductase chain 4
V [auth L]NADH-ubiquinone oxidoreductase chain 5
U [auth K]NADH-ubiquinone oxidoreductase chain 4L
T [auth J]NADH-ubiquinone oxidoreductase chain 6
B [auth 2]Mitochondrial complex I, 24 kDa subunit
S [auth H]NADH-ubiquinone oxidoreductase chain 1
R [auth A]NADH-ubiquinone oxidoreductase chain 3
AA [auth X],
Q [auth j]
Acyl carrier protein -
P [auth i]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-
O [auth h]Mitochondrial complex I, B14.5a subunit-
N [auth g]NADH:ubiquinone oxidoreductase subunit A6-
M [auth f]Mitochondrial complex I, B13 subunit-
L [auth e]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2- -
K [auth d]NADH:ubiquinone oxidoreductase subunit A9
J [auth c]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-
A [auth 1]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth b]IPR019401Zinc finger, CHCC-typeDomain
I [auth b]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
H [auth a]IPR026193NADH-ubiquinone oxidoreductase flavoprotein 3Family
G [auth 9]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
G [auth 9]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
G [auth 9]IPR010226NADH-quinone oxidoreductase, chain IFamily
F [auth 6]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
F [auth 6]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
E [auth 5]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
E [auth 5]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
E [auth 5]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
E [auth 5]IPR010218NADH dehydrogenase, subunit CFamily
SA [auth z]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
RA [auth y]IPR012575NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1, NDUB1Family
QA [auth x]IPR026192NADH-ubiquinone oxidoreductase 1 subunit C1Family
PA [auth w]IPR019329NADH:ubiquinone oxidoreductase, ESSS subunitFamily
OA [auth v]IPR008699NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8Family
OA [auth v]IPR016551NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, metazoaFamily
D [auth 4]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
D [auth 4]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
D [auth 4]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
D [auth 4]IPR001135NADH-quinone oxidoreductase, subunit DDomain
NA [auth u]IPR026627NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, animal typeFamily
MA [auth t]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
MA [auth t]IPR008011Complex 1 LYR protein domainDomain
MA [auth t]IPR045292NDUFB9, LYR domainDomain
LA [auth s]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
KA [auth r]IPR019174NADH dehydrogenase 1, beta subcomplex, subunit 6Family
JA [auth q]IPR009346GRIM-19Family
IA [auth p]IPR009866NADH:ubiquinone oxidoreductase, subunit NDUFB4Family
HA [auth o]IPR009423NADH dehydrogenase [ubiquinone] 1 subunit C2, NDUC2Family
GA [auth n]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
FA [auth m]IPR026626NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3Family
EA [auth l]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
EA [auth l]IPR024132AkirinFamily
C [auth 3]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
C [auth 3]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
C [auth 3]IPR006656Molybdopterin oxidoreductaseDomain
C [auth 3]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
C [auth 3]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
C [auth 3]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
C [auth 3]IPR054351NADH-ubiquinone oxidoreductase, ferredoxin-like domainDomain
C [auth 3]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
C [auth 3]IPR050123Prokaryotic molybdopterin-containing oxidoreductaseFamily
C [auth 3]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
DA [auth k]IPR031314Deoxynucleoside kinase domainDomain
DA [auth k]IPR050566Deoxyribonucleoside KinaseFamily
DA [auth k]IPR015828NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialFamily
DA [auth k]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
CA [auth Z]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
CA [auth Z]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
BA [auth Y]IPR010625CHCHDomain
BA [auth Y]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
Z [auth W]IPR019173NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunitFamily
Y [auth V]IPR039205NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11Family
X [auth N]IPR010933NADH dehydrogenase subunit 2, C-terminalDomain
X [auth N]IPR003917NADH:ubiquinone oxidoreductase, chain 2Family
X [auth N]IPR050175Complex I Subunit 2Family
X [auth N]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
W [auth M]IPR003918NADH:ubiquinone oxidoreductaseFamily
W [auth M]IPR010227NADH-quinone oxidoreductase, chain M/4Family
W [auth M]IPR000260NADH:ubiquinone oxidoreductase chain 4, N-terminalDomain
W [auth M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
V [auth L]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
V [auth L]IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
V [auth L]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
V [auth L]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domainDomain
V [auth L]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
U [auth K]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
U [auth K]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
T [auth J]IPR050269Complex I Subunit 6Family
T [auth J]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
T [auth J]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
B [auth 2]IPR042128NuoE domainDomain
B [auth 2]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
B [auth 2]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
B [auth 2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
S [auth H]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
S [auth H]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
R [auth A]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
R [auth A]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
AA [auth X],
Q [auth j]
IPR006162Phosphopantetheine attachment sitePTM
AA [auth X],
Q [auth j]
IPR009081Phosphopantetheine binding ACP domainDomain
AA [auth X],
Q [auth j]
IPR036736ACP-like superfamilyHomologous Superfamily
AA [auth X],
Q [auth j]
IPR003231Acyl carrier proteinFamily
P [auth i]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
O [auth h]IPR009947NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7Family
N [auth g]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
N [auth g]IPR008011Complex 1 LYR protein domainDomain
N [auth g]IPR045299NDUFA6, LYR domainDomain
M [auth f]IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5Family
L [auth e]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
L [auth e]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
L [auth e]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
K [auth d]IPR051207Mitochondrial Complex I NDUFA9 SubunitFamily
K [auth d]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
K [auth d]IPR001509NAD-dependent epimerase/dehydrataseDomain
J [auth c]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
J [auth c]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
A [auth 1]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
A [auth 1]IPR054765SLBB domainDomain
A [auth 1]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
A [auth 1]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
A [auth 1]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
A [auth 1]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
A [auth 1]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
A [auth 1]IPR050837Complex I 51 kDa subunitFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
D [auth 4]2MR Parent Component: ARG

RESIDAA0067

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076
DA [auth k]SEP Parent Component: SER

RESIDAA0067 , AA0037

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , O-phospho-L-serine MOD:00046
Y [auth V]AYA Parent Component: ALA

RESIDAA0067 , AA0037

W [auth M]FME Parent Component: MET

RESIDAA0067 , AA0037 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
V [auth L]FME Parent Component: MET

RESIDAA0067 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
U [auth K]FME Parent Component: MET

RESIDAA0067 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566

PSI-MOD :  symmetric dimethyl-L-arginine MOD:00076 , O-phospho-L-serine MOD:00046 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 , N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891
O [auth h]AYA Parent Component: ALA

RESIDAA0067 , AA0037 , AA0021 , AA0566 , AA0021 , AA0566 , AA0021 , AA0566