7Z8E | pdb_00007z8e

Crystal structure of the substrate-binding protein YejA from S. meliloti in complex with peptide fragment

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASBP_bac_5_1ste7z8eA1 A: a+b two layersX: Alpha-beta plaitsH: Oligo-peptide binding protein (OPPA) insertion domain (From Topology)T: Oligo-peptide binding protein (OPPA) insertion domainF: SBP_bac_5_1stECOD (1.6)
ASBP_bac_5_3rde7z8eA3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_5_3rdECOD (1.6)
ASBP_bac_5_2nde7z8eA2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_5_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.105.10 Alpha Beta Roll Dipeptide-binding Protein domain 3CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]SER-SER---
GLY-SER-ASP-VAL-ALA---
ABC transporter substrate-binding protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000914Solute-binding protein family 5 domainDomain
IPR039424Solute-binding protein family 5Family
IPR030678Peptide/nickel binding protein, MppA-typeFamily