7YWX
Structure of the human CCAN CENP-A alpha-satellite complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
N [auth S] | SCOP2B Superfamily | Core histone-like | 8058042 | 3001387 | SCOP2B (2022-06-29) |
O [auth X] | SCOP2B Superfamily | Core histone-like | 8053222 | 3001387 | SCOP2B (2022-06-29) |
R [auth A] | SCOP2B Superfamily | Core histone-like | 8070539 | 3001387 | SCOP2B (2022-06-29) |
V [auth E] | SCOP2B Superfamily | Core histone-like | 8070539 | 3001387 | SCOP2B (2022-06-29) |
S [auth B] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
W [auth F] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
T [auth C] | SCOP2B Superfamily | Core histone-like | 8067138 | 3001387 | SCOP2B (2022-06-29) |
X [auth G] | SCOP2B Superfamily | Core histone-like | 8067138 | 3001387 | SCOP2B (2022-06-29) |
U [auth D] | SCOP2B Superfamily | Core histone-like | 8066267 | 3001387 | SCOP2B (2022-06-29) |
Y [auth V] | SCOP2B Superfamily | Core histone-like | 8066267 | 3001387 | SCOP2B (2022-06-29) |
E [auth M] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8092489 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
L [auth T] | PF15511 | e7ywxT1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
M [auth W] | PF15510 | e7ywxW1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15510 | ECOD (1.6) |
N [auth S] | PF15630 | e7ywxS1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15630 | ECOD (1.6) |
O [auth X] | PF09415 | e7ywxX1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF09415 | ECOD (1.6) |
R [auth A] | PF00125 | e7ywxA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
V [auth E] | PF00125 | e7ywxE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
S [auth B] | PF15511 | e7ywxB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
W [auth F] | PF15511 | e7ywxF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
T [auth C] | PF00125,PF16211 | e7ywxC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
X [auth G] | PF00125,PF16211 | e7ywxG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
U [auth D] | PF00125 | e7ywxD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
Y [auth V] | PF00125 | e7ywxV1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
E [auth M] | PF11111 | e7ywxM1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF11111 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth H] | PF05837 | Centromere protein H (CENP-H) (CENP-H) | Centromere protein H (CENP-H) | This family consists of several eukaryotic centromere protein H (CENP-H) sequences. Macromolecular centromere-kinetochore complex plays a critical role in sister chromatid separation, but its complete protein composition as well as its precise dynami ... | Domain |
J [auth P] | PF13096 | CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P (CENP-P) | CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P | - | Family |
L [auth T] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
M [auth W] | PF15510 | CENP-W protein (CENP-W) | CENP-W protein | CENP-W is a family of vertebral kinetochore proteins that associates directly with CENP-T. CENP-W members are histone-fold proteins. The histone fold region is critical for binding to centromeric DNA. Importantly, the CENP-T-W complex does not direct ... | Domain |
N [auth S] | PF15630 | CENP-S protein (CENP-S) | CENP-S protein | CENP-S is a family of vertebral and fungal kinetochore component proteins. CENP-S complexes with CENP-X to form a stable CENP-T-W-S-X heterotetramer. | Domain |
O [auth X] | PF09415 | CENP-S associating Centromere protein X (CENP-X) | CENP-S associating Centromere protein X | The centromere, essential for faithful chromosome segregation during mitosis, has a network of constitutive centromere-associated (CCAN) proteins associating with it during mitosis. So far in vertebrates at least 15 centromere proteins have been iden ... | Domain |
R [auth A], V [auth E] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
S [auth B], W [auth F] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
T [auth C], X [auth G] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
T [auth C], X [auth G] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
U [auth D], Y [auth V] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
AA [auth b], Z [auth a] | PF15620 | Centromere assembly component CENP-C middle DNMT3B-binding region (CENP-C_mid) | Centromere assembly component CENP-C middle DNMT3B-binding region | - | Family |
C [auth K] | PF11802 | Centromere-associated protein K (CENP-K) | Centromere-associated protein K | - | Family |
D [auth L] | PF13092 | Kinetochore complex Sim4 subunit Fta1 (CENP-L) | Kinetochore complex Sim4 subunit Fta1 | - | Family |
E [auth M] | PF11111 | Centromere protein M (CENP-M) (CENP-M) | Centromere protein M (CENP-M) | - | Family |
F [auth N] | PF05238 | Kinetochore protein CHL4 like (CENP-N) | Kinetochore protein CHL4 like | - | Family |
G [auth O] | PF09496 | Cenp-O kinetochore centromere component (CENP-O) | Cenp-O kinetochore centromere component | - | Family |
H [auth Q] | PF13094 | CENP-Q, a CENPA-CAD centromere complex subunit (CENP-Q) | CENP-Q, a CENPA-CAD centromere complex subunit | - | Family |
I [auth U] | PF13097 | CENP-A nucleosome associated complex (NAC) subunit (CENP-U) | CENP-A nucleosome associated complex (NAC) subunit | - | Family |