7YRT | pdb_00007yrt

Crystal structure of PAS like domain of FlrB, the histidine kinase involved in flagellar synthesis of Vibrio cholerae

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LPASe7yrtL1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
KPASe7yrtK1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
JPASe7yrtJ1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
IPASe7yrtI1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
HPASe7yrtH1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
GPASe7yrtG1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
FPASe7yrtF1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
EPASe7yrtE1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
DPASe7yrtD1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
CPASe7yrtC1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
BPASe7yrtB1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
APASe7yrtA1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF13188PAS domain (PAS_8)PAS domainPAS domains are involved in many signalling proteins where they are used as a signal sensor domain [1]. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofac ...PAS domains are involved in many signalling proteins where they are used as a signal sensor domain [1]. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Heme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. This domain recognises oxygen and CO (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
histidine kinase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR035965PAS domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003594Histidine kinase/HSP90-like ATPase domainDomain
A, B, C, D, E
IPR005467Histidine kinase domainDomain
A, B, C, D, E
IPR000014PAS domainDomain
A, B, C, D, E
IPR050351Bacteriophytochrome/Sensor protein kinase WalK/GraS-likeFamily
A, B, C, D, E
IPR004358Signal transduction histidine kinase-related protein, C-terminalDomain
A, B, C, D, E
IPR036097Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR036890Histidine kinase/HSP90-like ATPase superfamilyHomologous Superfamily
A, B, C, D, E
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domainDomain