Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | Asparaginase_2 | e7yrnI1 | A: alpha arrays | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Asparaginase_2 | ECOD (v295.2) |
| F [auth G] | Asparaginase_2 | e7yrnG1 | A: alpha arrays | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Asparaginase_2 | ECOD (v295.2) |
| C [auth E] | Ribosomal_S5_C | e7yrnE1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_S5_C | ECOD (v295.2) |
| H | Asparaginase_2 | e7yrnH1 | A: alpha arrays | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Asparaginase_2 | ECOD (v295.2) |
| E [auth F] | Asparaginase_2 | e7yrnF1 | A: alpha arrays | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Asparaginase_2 | ECOD (v295.2) |
| B [auth D] | Ribosomal_S5_C | e7yrnD1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Ribosomal_S5_C | ECOD (v295.2) |
| G [auth C] | AAA_6 | e7yrnC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_6 | ECOD (v295.2) |
| D [auth B] | AAA_6 | e7yrnB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_6 | ECOD (v295.2) |
| A | RecA | e7yrnA01 | A: alpha arrays | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: RecA | ECOD (v295.2) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| C [auth E], F [auth G], I | Light Chain | IGKV1 | Kappa | envelope glycoprotein b | SAbDab (2026-10-16) |
| B [auth D], E [auth F], H | Heavy Chain | IGHV5 | - | envelope glycoprotein b | SAbDab (2026-10-16) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| C [auth E], F [auth G], I | 1B03 Fab antibody Light Chain | - | - | - |
| B [auth D], E [auth F], H | 1B03 Fab antibody Heavy Chain | - | - | - |
| A, D [auth B], G [auth C] | Envelope glycoprotein B | - |
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