7YGI | pdb_00007ygi

Crystal structure of p53 DBD domain in complex with azurin


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyCupredoxins 8037683 3000886 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCupredoxins 8037683 3000886 SCOP2B (2022-06-29)
BSCOP2B Superfamilyp53-like transcription factors 8036866 3000758 SCOP2B (2022-06-29)
ASCOP2B Superfamilyp53-like transcription factors 8036866 3000758 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCopper-binde7ygiD1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: Copper-bindECOD (1.6)
CCopper-binde7ygiC1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: Copper-bindECOD (1.6)
BP53e7ygiB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: P53ECOD (1.6)
AP53e7ygiA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: P53ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (utative)
C2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF00127Copper binding proteins, plastocyanin/azurin family (Copper-bind)Copper binding proteins, plastocyanin/azurin familyDomain
A, B
PF00870P53 DNA-binding domain (P53)P53 DNA-binding domainThis family contains one anomalous member, viz: Zea mays (Q6JAD8). This sequence is identical to human P53 and would appear to be a a human contaminant within the Zea mays sampling effort. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Azurin -
A, B
Cellular tumor antigen p53

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
PharosP04637