7YEV
In situ structure of polymerase complex of mammalian reovirus in the pre-elongation state
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth A] | PF22033 | e7yevA1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
U [auth d] | PF22033 | e7yevd1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
V [auth e] | PF22033 | e7yeve1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
I [auth D] | PF22033 | e7yevD1 | A: a+b complex topology | X: Inner layer core protein p3-related (From Topology) | H: Inner layer core protein p3-related (From Topology) | T: Inner layer core protein p3-related | F: PF22033 | ECOD (1.6) |
K [auth H] | PF21062 | e7yevH5 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
K [auth H] | PF21063 | e7yevH2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
K [auth H] | PF21064 | e7yevH4 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
K [auth H] | PF21065 | e7yevH1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
K [auth H] | PF21066 | e7yevH3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
L [auth I] | PF21062 | e7yevI5 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
L [auth I] | PF21063 | e7yevI2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
L [auth I] | PF21064 | e7yevI4 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
L [auth I] | PF21065 | e7yevI1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
L [auth I] | PF21066 | e7yevI3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
N [auth K] | PF21062 | e7yevK5 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
N [auth K] | PF21063 | e7yevK2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
N [auth K] | PF21064 | e7yevK4 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
N [auth K] | PF21065 | e7yevK1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
N [auth K] | PF21066 | e7yevK3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
O [auth L] | PF21062 | e7yevL5 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
O [auth L] | PF21063 | e7yevL2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
O [auth L] | PF21064 | e7yevL4 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
O [auth L] | PF21065 | e7yevL1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
O [auth L] | PF21066 | e7yevL3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
M [auth J] | PF21062 | e7yevJ5 | A: a+b two layers | X: ferredoxin-like domain in VP1 (From Topology) | H: ferredoxin-like domain in VP1 (From Topology) | T: ferredoxin-like domain in VP1 | F: PF21062 | ECOD (1.6) |
M [auth J] | PF21063 | e7yevJ2 | A: a+b three layers | X: HIT-like | H: HIT-related (From Topology) | T: HIT-related | F: PF21063 | ECOD (1.6) |
M [auth J] | PF21064 | e7yevJ4 | A: a+b complex topology | X: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | H: Rotavirus NSP2 fragment, N-terminal domain (From Topology) | T: Rotavirus NSP2 fragment, N-terminal domain | F: PF21064 | ECOD (1.6) |
M [auth J] | PF21065 | e7yevJ1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21065 | ECOD (1.6) |
M [auth J] | PF21066 | e7yevJ3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF21066 | ECOD (1.6) |
P [auth R] | PF07925 | e7yevR1 | A: alpha bundles | X: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | H: helical bundle domain in reverse transcriptase-like polymerases (From Topology) | T: helical bundle domain in reverse transcriptase-like polymerases | F: PF07925 | ECOD (1.6) |
P [auth R] | PF07925 | e7yevR3 | A: alpha complex topology | X: C-terminal additional helical subdomain in reovirus polymerase lambda3 (From Topology) | H: C-terminal additional helical subdomain in reovirus polymerase lambda3 (From Topology) | T: C-terminal additional helical subdomain in reovirus polymerase lambda3 | F: PF07925 | ECOD (1.6) |
P [auth R] | PF07925 | e7yevR2 | A: alpha complex topology | X: N-terminal additional helical subdomain in reovirus polymerase lambda3 (From Homology) | H: N-terminal additional helical subdomain in reovirus polymerase lambda3 | T: N-terminal additional helical subdomain in reovirus polymerase lambda3 | F: PF07925 | ECOD (1.6) |
P [auth R] | PF07925 | e7yevR4 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF07925 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
K [auth H], L [auth I], M [auth J], N [auth K], O [auth L] | PF21064 | Reovirus core-spike protein lambda-2 (L2), N-terminal (Reovirus_L2_N) | Reovirus core-spike protein lambda-2 (L2), N-terminal | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
K [auth H], L [auth I], M [auth J], N [auth K], O [auth L] | PF21063 | Reovirus core-spike protein lambda-2 (L2), GTase domain (Reovirus_L2_GTase) | Reovirus core-spike protein lambda-2 (L2), GTase domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
K [auth H], L [auth I], M [auth J], N [auth K], O [auth L] | PF21066 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 (Reovirus_L2_MT2) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-2 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
K [auth H], L [auth I], M [auth J], N [auth K], O [auth L] | PF21065 | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 (Reovirus_L2_MT1) | Reovirus core-spike protein lambda-2 (L2), methyltransferase-1 | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
K [auth H], L [auth I], M [auth J], N [auth K], O [auth L] | PF21062 | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain (Reovirus_L2_4th) | Reovirus core-spike protein lambda-2 (L2), ferredoxin-like domain | Reovirus core-spike protein VP1/lambda-2 (VP1/L2) forms a pentamer that mediates enzymatic reactions in 5' capping of the viral plus-strand transcripts [1]. It forms a hollow cylinder with projecting turrets. Each VP1/L2 monomer consists of eight dom ... | Domain |
P [auth R] | PF07925 | Reovirus RNA-dependent RNA polymerase lambda 3 (RdRP_5) | Reovirus RNA-dependent RNA polymerase lambda 3 | - | Family |
Q [auth U] | PF07781 | Reovirus minor core protein Mu-2 (Reovirus_Mu2) | Reovirus minor core protein Mu-2 | - | Family |