7Y96

Crystal structure of the carboxy-terminal domain of a coronavirus M protein fused with a split GFP

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF01353,PF01635	e7y96A1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: PF01353,PF01635	ECOD (1.6)
B	PF01353,PF01635	e7y96B1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: PF01353,PF01635	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01635	Coronavirus M matrix/glycoprotein (CoV_M)	Coronavirus M matrix/glycoprotein	-	Family
A, B	PF01353	Green fluorescent protein (GFP)	Green fluorescent protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Green fluorescent protein,Membrane protein	structural constituent of virion structural molecule activity	bioluminescence cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy symbiont-mediated perturbation of host defense response response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to defenses of other organism modulation by virus of host process response to external stimulus virus-mediated perturbation of host defense response bioluminescence cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy symbiont-mediated perturbation of host defense response response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to defenses of other organism modulation by virus of host process response to external stimulus virus-mediated perturbation of host defense response biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction modulation by symbiont of host process viral process response to host response to external biotic stimulus modulation of process of another organism modulation by virus of host cellular process	virion component viral membrane viral envelope membrane cellular anatomical entity virion membrane host cellular component host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell membrane host cell cytoplasm part host cell cytoplasm host cell part virion component viral membrane viral envelope membrane cellular anatomical entity virion membrane host cellular component host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell membrane host cell cytoplasm part host cell cytoplasm host cell part host cell endomembrane system host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000786	Green fluorescent protein, GFP	Family
A, B	IPR011584	Green fluorescent protein-related	Family
A, B	IPR009017	Green fluorescent protein	Homologous Superfamily
A, B	IPR002574	M matrix/glycoprotein, coronavirus	Family
A, B	IPR044363	M matrix/glycoprotein, MERS-like-CoV	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.