7Y4Q | pdb_00007y4q

Semaphorin 6D in complex with Plexin A1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth C]FAD_binding_4e7y4qC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: FAD_binding_4ECOD (v294.1)
C [auth D]FAD_binding_4e7y4qD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: FAD_binding_4ECOD (v294.1)
B [auth A]FAD_binding_4e7y4qA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: FAD_binding_4ECOD (v294.1)
A [auth B]FAD_binding_4e7y4qB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: FAD_binding_4ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth D],
D [auth C]		PF01437Plexin repeat (PSI)Plexin repeat- Family
C [auth D],
D [auth C]		PF01403Sema domain (Sema)Sema domain- Repeat
A [auth B],
B [auth A]		PF01437Plexin repeat (PSI)Plexin repeat- Family
A [auth B],
B [auth A]		PF24479Plexin A/B, PSI domain (PSI_PlexinA-B)Plexin A/B, PSI domainThis entry represents a PSI domain found in Plexin A, B and related proteins. These are neuronal receptors for the axon guidance regulators Semaphorins. Semaphorin-plexin interactions play central roles in regulating processes such as neuronal axon g ...This entry represents a PSI domain found in Plexin A, B and related proteins. These are neuronal receptors for the axon guidance regulators Semaphorins. Semaphorin-plexin interactions play central roles in regulating processes such as neuronal axon guidance, angiogenesis and immune responses [1,2].
Domain
A [auth B],
B [auth A]		PF01403Sema domain (Sema)Sema domain- Repeat
A [auth B],
B [auth A]		PF17960TIG domain (TIG_plexin)TIG domainThis entry represents an TIG or IPT domain (Ig domain shared by Plexins and Transcription factors) found in plexins [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D],
D [auth C]		Semaphorin 6D
A [auth B],
B [auth A]		Plexin-A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth D],
D [auth C]		IPR002165Plexin repeatRepeat
C [auth D],
D [auth C]		IPR036352Sema domain superfamilyHomologous Superfamily
C [auth D],
D [auth C]		IPR001627Sema domainDomain
C [auth D],
D [auth C]		IPR027231SemaphorinFamily
C [auth D],
D [auth C]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth B],
B [auth A]		IPR042744Plexin-A1, Sema domainDomain
A [auth B],
B [auth A]		IPR002909IPT domainDomain
A [auth B],
B [auth A]		IPR041362Plexin, TIG domain 2Domain
A [auth B],
B [auth A]		IPR016201PSI domainDomain
A [auth B],
B [auth A]		IPR014756Immunoglobulin E-setHomologous Superfamily
A [auth B],
B [auth A]		IPR008936Rho GTPase activation proteinHomologous Superfamily
A [auth B],
B [auth A]		IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth B],
B [auth A]		IPR002165Plexin repeatRepeat
A [auth B],
B [auth A]		IPR041019Plexin, TIG domain 1Domain
A [auth B],
B [auth A]		IPR031148Plexin familyFamily
A [auth B],
B [auth A]		IPR046800Plexin, cytoplasmic RhoGTPase-binding domainDomain
A [auth B],
B [auth A]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth B],
B [auth A]		IPR013548Plexin, cytoplasmic RasGAP domainDomain
A [auth B],
B [auth A]		IPR036352Sema domain superfamilyHomologous Superfamily
A [auth B],
B [auth A]		IPR001627Sema domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B],
B [auth A]		Pharos:  Q9UIW2