7XX6
Crystal Structure of Nucleosome-H1.0 Linker Histone Assembly (sticky-169a DNA fragment)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
EA [auth e] | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
IA [auth i] | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
Y | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
FA [auth f] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
JA [auth j] | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
Z | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
AA [auth a] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
GA [auth g] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
KA [auth k] | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
BA [auth b] | SCOP2B Superfamily | Core histone-like | 8066265 | 3001387 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | Core histone-like | 8066265 | 3001387 | SCOP2B (2022-06-29) |
OA [auth o] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8094387 | 3000034 | SCOP2B (2022-06-29) |
PA [auth p] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8094387 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00125 | e7xx6A1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
E | PF00125 | e7xx6E1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
EA [auth e] | PF00125 | e7xx6e1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
IA [auth i] | PF00125 | e7xx6i1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
K | PF00125 | e7xx6K1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
O | PF00125 | e7xx6O1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
U | PF00125 | e7xx6U1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
Y | PF00125 | e7xx6Y1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
B | PF15511 | e7xx6B1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
F | PF15511 | e7xx6F1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
FA [auth f] | PF15511 | e7xx6f1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
JA [auth j] | PF15511 | e7xx6j1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
L | PF15511 | e7xx6L1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
P | PF15511 | e7xx6P1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
V | PF15511 | e7xx6V1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
Z | PF15511 | e7xx6Z1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
AA [auth a] | PF00125,PF16211 | e7xx6a1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
C | PF00125,PF16211 | e7xx6C1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
G | PF00125,PF16211 | e7xx6G1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
GA [auth g] | PF00125,PF16211 | e7xx6g1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
KA [auth k] | PF00125,PF16211 | e7xx6k1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
M | PF00125,PF16211 | e7xx6M1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
Q | PF00125,PF16211 | e7xx6Q1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
W | PF00125,PF16211 | e7xx6W1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
BA [auth b] | PF00125 | e7xx6b1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
D | PF00125 | e7xx6D1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
H | PF00125 | e7xx6H1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
HA [auth h] | PF00125 | e7xx6h1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
LA [auth l] | PF00125 | e7xx6l1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
N | PF00125 | e7xx6N1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
R | PF00125 | e7xx6R1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
X | PF00125 | e7xx6X1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
OA [auth o] | PF00538 | e7xx6o1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00538 | ECOD (1.6) |
PA [auth p] | PF00538 | e7xx6p1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF00538 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain | |
PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain | |
PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain | |
OA [auth o], PA [auth p] | PF00538 | linker histone H1 and H5 family (Linker_histone) | linker histone H1 and H5 family | Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. | Domain |