7XTG | pdb_00007xtg

Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E, I, L [auth Z]	PF03613	PTS system mannose/fructose/sorbose family IID component (EIID-AGA)	PTS system mannose/fructose/sorbose family IID component	-	Family
D, H, K [auth Y]	PF03609	PTS system sorbose-specific iic component (EII-Sor)	PTS system sorbose-specific iic component	-	Family
A, C, G	PF01721	Class II bacteriocin (Bacteriocin_II)	Class II bacteriocin	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, I, L [auth Z]	Mannose permease IID component	transferase activity catalytic activity	import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system transport import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport establishment of localization transmembrane transport localization cellular process carbohydrate transmembrane transport	cell periphery cellular anatomical structure plasma membrane membrane
D, H, K [auth Y]	Mannose permease IIC component	transferase activity catalytic activity	import into cell phosphoenolpyruvate-dependent sugar phosphotransferase system transport import across plasma membrane carbohydrate import across plasma membrane carbohydrate transport establishment of localization transmembrane transport localization cellular process carbohydrate transmembrane transport	cell periphery cellular anatomical structure plasma membrane membrane
B, F, J	Sakacin-A immunity factor	-	metabolic process cellular process bacteriocin immunity toxin metabolic process secondary metabolic process	-
A, C, G	Bacteriocin curvacin-A	-	defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, I, L [auth Z]	IPR050303	GatZ/KbaZ carbohydrate metabolism	Family
E, I, L [auth Z]	IPR004704	Phosphotransferase system, mannose/fructose/sorbose family IID component	Family
D, H, K [auth Y]	IPR050303	GatZ/KbaZ carbohydrate metabolism	Family
D, H, K [auth Y]	IPR004700	Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit	Family
A, C, G	IPR002633	Bacteriocin, class IIa	Family
A, C, G	IPR023388	Bacteriocin class IIa domain superfamily	Homologous Superfamily
A, C, G	IPR023384	Bacteriocin, class IIa, conserved site	Conserved Site
A, C, G	IPR010133	Bacteriocin-type signal sequence	Conserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
D, E, H, I, K [auth Y] D, E, H, I, K [auth Y], L [auth Z]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
D, E, H, I, K [auth Y] D, E, H, I, K [auth Y], L [auth Z]	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.