7XQ5 | pdb_00007xq5

Crystal structure of ScIno2p-ScIno4p bound promoter DNA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be7xq5B1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Beta-prism_lecF:ECOD (20:10:01)
Ae7xq5A1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: bHLH_INO4F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF23179INO2 bHLH domain (bHLH_INO2)INO2 bHLH domainThe founding member of this family is the bHLH domain of yeast protein INO2. This protein is a positive regulatory factor involved in the transcriptional regulation of phospholipid biosynthetic genes. INO2 forms a heterodimer with INO4 and this compl ...The founding member of this family is the bHLH domain of yeast protein INO2. This protein is a positive regulatory factor involved in the transcriptional regulation of phospholipid biosynthetic genes. INO2 forms a heterodimer with INO4 and this complex specifically recognizes the inositol/choline-responsive element, followed by the transcription activation of the phospholipid biosynthetic gene. Ternary INO2(bHLH)/INO4(bHLH)/DNA complex showed that the recognition and binding of promoter DNA is mediated by the presence of both protein domains [1].
Domain
PF23181INO4 bHLH domain (bHLH_INO4)INO4 bHLH domainThe founding member of this family is the bHLH domain of yeast protein INO4. This protein is a positive regulatory factor involved in the transcriptional regulation of phospholipid biosynthetic genes. INO4 forms a heterodimer with INO2 and this compl ...The founding member of this family is the bHLH domain of yeast protein INO4. This protein is a positive regulatory factor involved in the transcriptional regulation of phospholipid biosynthetic genes. INO4 forms a heterodimer with INO2 and this complex specifically recognizes the inositol/choline-responsive element, followed by the transcription activation of the phospholipid biosynthetic gene. Ternary INO2(bHLH)/INO4(bHLH)/DNA complex showed that the recognition and binding of promoter DNA is mediated by the presence of both protein domains [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*GP*AP*TP*TP*TP*TP*CP*AP*CP*AP*TP*GP*CP*AP*G)-3')---
DNA (5'-D(P*CP*CP*TP*GP*CP*AP*TP*GP*TP*GP*AP*AP*AP*AP*T)-3')---
Protein INO2
Protein INO4