Cryo-EM structure of N1 nucleosome-RA
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF00125 | e7x3xA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
E | PF00125 | e7x3xE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
B | PF15511 | e7x3xB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
F | PF15511 | e7x3xF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
C | PF00125,PF16211 | e7x3xC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
G | PF00125,PF16211 | e7x3xG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
D | PF00125 | e7x3xD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
H | PF00125 | e7x3xH1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| Histone H3 | | - | |
| Histone H4 | | - | |
| Histone H2A | | - | |
| Histone H2B 1.1 | | - | |
| DNA (146-MER) | - | - | - |
| DNA (146-MER) | - | - | - |
K [auth V] | ISWI chromatin-remodeling complex ATPase ISW1 | | | |
Chains | Accession | Name | Type |
---|
| IPR009072 | Histone-fold | Homologous Superfamily |
| IPR007125 | Histone H2A/H2B/H3 | Domain |
| IPR000164 | Histone H3/CENP-A | Family |
| IPR009072 | Histone-fold | Homologous Superfamily |
| IPR001951 | Histone H4 | Family |
| IPR035425 | CENP-T/Histone H4, histone fold | Domain |
| IPR019809 | Histone H4, conserved site | Conserved Site |
| IPR004823 | TATA box binding protein associated factor (TAF), histone-like fold domain | Domain |
| IPR009072 | Histone-fold | Homologous Superfamily |
| IPR007125 | Histone H2A/H2B/H3 | Domain |
| IPR002119 | Histone H2A | Family |
| IPR032454 | Histone H2A, C-terminal domain | Domain |
| IPR032458 | Histone H2A conserved site | Conserved Site |
| IPR009072 | Histone-fold | Homologous Superfamily |
| IPR007125 | Histone H2A/H2B/H3 | Domain |
| IPR000558 | Histone H2B | Family |
K [auth V] | IPR000330 | SNF2, N-terminal | Domain |
K [auth V] | IPR015195 | SLIDE domain | Domain |
K [auth V] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |
K [auth V] | IPR036306 | ISWI, HAND domain superfamily | Homologous Superfamily |
K [auth V] | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain | Domain |
K [auth V] | IPR015194 | ISWI, HAND domain | Domain |
K [auth V] | IPR038718 | SNF2-like, N-terminal domain superfamily | Homologous Superfamily |
K [auth V] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
K [auth V] | IPR001650 | Helicase, C-terminal domain-like | Domain |
K [auth V] | IPR044754 | Isw1/2, N-terminal | Domain |
K [auth V] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
K [auth V] | IPR017884 | SANT domain | Domain |
K [auth V] | IPR001005 | SANT/Myb domain | Domain |