Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8094461 3000850 SCOP2B (2022-06-29)
J [auth 7]SCOP2B SuperfamilyChlorophyll a-b binding protein8100068 3000343 SCOP2B (2022-06-29)
K [auth 8]SCOP2B SuperfamilyChlorophyll a-b binding protein8099930 3000343 SCOP2B (2022-06-29)
L [auth Z]SCOP2B SuperfamilyChlorophyll a-b binding protein8099102 3000343 SCOP2B (2022-06-29)
M [auth 4]SCOP2B SuperfamilyChlorophyll a-b binding protein8099934 3000343 SCOP2B (2022-06-29)
N [auth 5]SCOP2B SuperfamilyChlorophyll a-b binding protein8099932 3000343 SCOP2B (2022-06-29)
O [auth 6]SCOP2B SuperfamilyChlorophyll a-b binding protein8099928 3000343 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB8094499 3000850 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins8093860 3000020 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhotosystem I subunit PsaD8095071 3000951 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyElectron transport accessory proteins8094773 3000325 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySubunit III of photosystem I reaction centre PsaF8094180 3000813 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre PsaJ8094723 3000824 SCOP2B (2022-06-29)
H [auth 1]SCOP2B SuperfamilyChlorophyll a-b binding protein8099102 3000343 SCOP2B (2022-06-29)
I [auth 3]SCOP2B SuperfamilyChlorophyll a-b binding protein8105868 3000343 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00223e7wznA2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
APF00223e7wznA1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
J [auth 7]PF00504e7wzn71 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
K [auth 8]PF00504e7wzn81 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
L [auth Z]PF00504e7wznZ1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
M [auth 4]PF00504e7wzn41 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
N [auth 5]PF00504e7wzn51 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
O [auth 6]PF00504e7wzn61 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
P [auth G]PF00111e7wznG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF00111ECOD (1.6)
BPF00223e7wznB2 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: PF00223ECOD (1.6)
BPF00223e7wznB1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PF00223ECOD (1.6)
CPF00037e7wznC1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
DPF02531e7wznD1 A: a+b two layersX: Photosystem I subunit PsaD (From Topology)H: Photosystem I subunit PsaD (From Topology)T: Photosystem I subunit PsaDF: PF02531ECOD (1.6)
EPF02427e7wznE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF02427ECOD (1.6)
FPF02507e7wznF1 A: extended segmentsX: Subunit III of photosystem I reaction centre, PsaF (From Topology)H: Subunit III of photosystem I reaction centre, PsaF (From Topology)T: Subunit III of photosystem I reaction centre, PsaFF: PF02507ECOD (1.6)
G [auth J]PF01701e7wznJ1 A: extended segmentsX: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology)T: Subunit IX of photosystem I reaction centre, PsaJF: PF01701ECOD (1.6)
H [auth 1]PF00504e7wzn11 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)
I [auth 3]PF00504e7wzn31 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: PF00504ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
J [auth 7]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
K [auth 8]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
L [auth Z]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
M [auth 4]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
N [auth 5]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
O [auth 6]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
P [auth G]PF11591Ferredoxin chloroplastic transit peptide (2Fe-2S_Ferredox)Ferredoxin chloroplastic transit peptide- Family
P [auth G]PF001112Fe-2S iron-sulfur cluster binding domain (Fer2)2Fe-2S iron-sulfur cluster binding domain- Domain
PF00223Photosystem I psaA/psaB protein (PsaA_PsaB)Photosystem I psaA/psaB protein- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF02531PsaD (PsaD)PsaD- Family
PF02427Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE)Photosystem I reaction centre subunit IV / PsaEPsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1].Domain
PF02507Photosystem I reaction centre subunit III (PSI_PsaF)Photosystem I reaction centre subunit III- Family
G [auth J]PF01701Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ)Photosystem I reaction centre subunit IX / PsaJ- Family
H [auth 1]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
I [auth 3]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Photosystem I P700 chlorophyll a apoprotein A1
J [auth 7]Chlorophyll a-b binding protein, chloroplastic
K [auth 8]Chlorophyll a-b binding protein, chloroplastic
L [auth Z]Chlorophyll a-b binding protein, chloroplastic
M [auth 4]Chlorophyll a-b binding protein, chloroplastic
N [auth 5]Chlorophyll a-b binding protein, chloroplastic
O [auth 6]Chlorophyll a-b binding protein, chloroplastic
P [auth G]Ferredoxin, chloroplastic -
Photosystem I P700 chlorophyll a apoprotein A2
Photosystem I iron-sulfur center
Photosystem I reaction center subunit II, chloroplastic-
Photosystem I reaction center subunit IV, chloroplastic-
Photosystem I reaction center subunit III, chloroplastic-
G [auth J]Photosystem I reaction center subunit IX-
H [auth 1]Chlorophyll a-b binding protein, chloroplastic
I [auth 3]Chlorophyll a-b binding protein, chloroplastic

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006243Photosystem I PsaAFamily
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
J [auth 7]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
J [auth 7]IPR022796Chlorophyll A-B binding proteinFamily
K [auth 8]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
K [auth 8]IPR022796Chlorophyll A-B binding proteinFamily
L [auth Z]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
L [auth Z]IPR022796Chlorophyll A-B binding proteinFamily
M [auth 4]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
M [auth 4]IPR022796Chlorophyll A-B binding proteinFamily
N [auth 5]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
N [auth 5]IPR022796Chlorophyll A-B binding proteinFamily
O [auth 6]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
O [auth 6]IPR022796Chlorophyll A-B binding proteinFamily
P [auth G]IPR023383Ferredoxin, chloroplast transit peptideDomain
P [auth G]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
P [auth G]IPR010241Ferredoxin [2Fe-2S], plantFamily
P [auth G]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
P [auth G]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
P [auth G]IPR0060582Fe-2S ferredoxin, iron-sulphur binding siteBinding Site
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
IPR001280Photosystem I PsaA/PsaBFamily
IPR006244Photosystem I PsaBFamily
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR017491Photosystem I protein PsaCFamily
IPR003685Photosystem I PsaDFamily
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
G [auth J]IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
G [auth J]IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
H [auth 1]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
H [auth 1]IPR022796Chlorophyll A-B binding proteinFamily
I [auth 3]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
I [auth 3]IPR022796Chlorophyll A-B binding proteinFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneAlpha-helical polytopicPhotosystemsPhotosystem I

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM