7WSM | pdb_00007wsm

Cryo-EM structure of human glucose transporter GLUT4 bound to cytochalasin B in lipid nanodiscs

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PhnJ	e7wsmA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PhnJ	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00083	Sugar (and other) transporter (Sugar_tr)	Sugar (and other) transporter	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Solute carrier family 2, facilitated glucose transporter member 4	hexose uniporter activity monosaccharide transmembrane transporter activity sugar transmembrane transporter activity D-glucose uniporter activity hexose transmembrane transporter activity secondary active transmembrane transporter activity active transmembrane transporter activity transporter activity uniporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity D-glucose transmembrane transporter activity	response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus cellular process response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus cellular process fat cell proliferation cell population proliferation white fat cell proliferation developmental process fat cell differentiation cellular developmental process brown fat cell differentiation cell differentiation transmembrane transport localization hexose transmembrane transport transport D-glucose transmembrane transport carbohydrate transport monosaccharide transmembrane transport carbohydrate transmembrane transport establishment of localization response to osmotic stress cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to abiotic stimulus establishment of organelle localization import into cell vesicle budding from membrane cellular localization regulation of cellular component organization regulation of cellular process regulation of synaptic vesicle budding from presynaptic endocytic zone membrane synaptic vesicle cycle vesicle-mediated transport presynaptic endocytosis vesicle-mediated transport in synapse cellular component organization vesicle organization synaptic vesicle recycling organelle localization establishment of localization in cell synaptic vesicle budding cellular component organization or biogenesis synaptic vesicle localization synaptic vesicle endocytosis membrane organization vesicle localization regulation of biological process establishment of vesicle localization biological regulation regulation of organelle organization synaptic vesicle budding from presynaptic endocytic zone membrane organelle organization endocytosis synaptic vesicle transport multicellular organismal process system process circulatory system process vascular process in circulatory system vascular transport transport across blood-brain barrier chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis positive regulation of cell communication positive regulation of signal transduction signaling regulation of brain-derived neurotrophic factor receptor signaling pathway positive regulation of biological process regulation of signal transduction cell surface receptor protein tyrosine kinase signaling pathway cell communication positive regulation of response to stimulus signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cellular process regulation of signaling cell surface receptor signaling pathway positive regulation of brain-derived neurotrophic factor receptor signaling pathway regulation of response to stimulus brain-derived neurotrophic factor receptor signaling pathway regulation of cell communication positive regulation of signaling carbohydrate metabolic process primary metabolic process metabolic process cellular response to nitrogen compound response to peptide hormone carbohydrate import across plasma membrane hexose import across plasma membrane cellular response to endogenous stimulus response to hormone glucose import in response to insulin stimulus cellular response to hormone stimulus response to endogenous stimulus import across plasma membrane response to oxygen-containing compound cellular response to peptide hormone stimulus response to nitrogen compound cellular response to oxygen-containing compound D-glucose import across plasma membrane response to insulin cellular response to insulin stimulus response to alcohol response to ethanol behavior learning or memory long-term memory nervous system process cognition memory response to peptide cellular response to tumor necrosis factor response to cytokine cellular response to cytokine stimulus response to tumor necrosis factor short-term memory organic anion transport dehydroascorbic acid transport vitamin transport carbohydrate derivative biosynthetic process biosynthetic process amylopectin metabolic process carbohydrate derivative metabolic process macromolecule metabolic process macromolecule biosynthetic process amylopectin biosynthetic process	cell periphery cellular anatomical structure sarcolemma plasma membrane membrane T-tubule cell surface external side of plasma membrane side of membrane clathrin-coated pit endomembrane system extracellular exosome membrane-bounded organelle extracellular vesicle cell periphery cellular anatomical structure sarcolemma plasma membrane membrane T-tubule cell surface external side of plasma membrane side of membrane clathrin-coated pit endomembrane system extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol vesicle membrane organelle membrane Golgi apparatus subcompartment Golgi apparatus organelle subcompartment intracellular membrane-bounded organelle intracellular organelle trans-Golgi network perinuclear region of cytoplasm sarcoplasm endoplasmic reticulum sarcoplasmic reticulum intracellular vesicle insulin-responsive compartment cytoplasmic vesicle secretory granule secretory vesicle clathrin-coated vesicle coated vesicle membrane microdomain membrane raft presynapse synapse cell junction endosome late endosome multivesicular body cytoplasmic vesicle membrane transport vesicle trans-Golgi network transport vesicle Golgi-associated vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR005829	Sugar transporter, conserved site	Conserved Site
A	IPR020846	Major facilitator superfamily domain	Domain
A	IPR003663	Sugar/inositol transporter	Family
A	IPR002441	Glucose transporter, type 4 (GLUT4)	Family
A	IPR045263	Glucose transporter GLUT	Family
A	IPR005828	Major facilitator, sugar transporter-like	Family
A	IPR036259	MFS transporter superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P14672	type 2 diabetes mellitus Alzheimer disease Insulin Resistance inherited lipid metabolism disorder obesity disorder psoriasis acquired metabolic disease vascular disease diabetes mellitus Hashimoto thyroiditis hypothyroidism maturity-onset diabetes of the young prediabetes syndrome hyperglycemia inborn carbohydrate metabolic disorder type 2 diabetes mellitus Alzheimer disease Insulin Resistance inherited lipid metabolism disorder obesity disorder psoriasis acquired metabolic disease vascular disease diabetes mellitus Hashimoto thyroiditis hypothyroidism maturity-onset diabetes of the young prediabetes syndrome hyperglycemia inborn carbohydrate metabolic disorder melanoma hyperinsulinism

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Transmembrane	Alpha-helical polytopic	Major Facilitator Superfamily (MFS)	Sugar porter family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Major Facilitator Superfamily (MFS) Transporters	GLUT4 glucose transporter with bound cytochalasin B in lipid nanodiscs

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.