Annotations: 7WJQ

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Gasdermin_N	e7wjqB1	A: beta complex topology	X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)	H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)	T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains	F: Gasdermin_N	ECOD (1.6)
B	Gasdermin_C	e7wjqB2	A: a+b two layers	X: R3H domain-like	H: PUB domain (From Topology)	T: PUB domain	F: Gasdermin_C	ECOD (1.6)
A	LRR_8_3	e7wjqA1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Leucine-rich repeats (From Topology)	T: Leucine-rich repeats	F: LRR_8_3	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF04598	Gasdermin pore forming domain (Gasdermin)	Gasdermin pore forming domain	The precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resis ...	The precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resistance in melanoma cells [2]. This family also includes the gasdermin protein [3]	Domain
A	PF12468	Type III secretion system leucine rich repeat protein (LRR_TTSS)	Type III secretion system leucine rich repeat protein	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Isoform 2 of Gasdermin-B	binding ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity binding ion binding phosphatidylinositol-4,5-bisphosphate binding anion binding phosphatidylinositol bisphosphate binding phospholipid binding lipid binding phosphatidylinositol phosphate binding phosphatidylinositol binding small molecule binding wide pore channel activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity phosphatidylinositol-4-phosphate binding phosphatidylglycerol binding cardiolipin binding modified amino acid binding phosphatidylserine binding	response to stimulus defense response response to stress pyroptotic cell death pyroptotic inflammatory response cytotoxic T cell pyroptotic cell death cellular process inflammatory response cell death programmed cell death biological process involved in interspecies interaction between organisms response to other organism defense response to symbiont response to external stimulus response to stimulus defense response response to stress pyroptotic cell death pyroptotic inflammatory response cytotoxic T cell pyroptotic cell death cellular process inflammatory response cell death programmed cell death biological process involved in interspecies interaction between organisms response to other organism defense response to symbiont response to external stimulus disruption of cell in another organism response to biotic stimulus biological process involved in symbiotic interaction killing by host of symbiont cells defense response to other organism response to external biotic stimulus disruption of anatomical structure in another organism biological process involved in interaction with symbiont killing of cells of another organism cell killing defense response to Gram-negative bacterium defense response to bacterium response to bacterium	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm
A	Probable E3 ubiquitin-protein ligase ipaH7.8	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity	catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process cellular process macromolecule metabolic process protein metabolic process symbiont-mediated perturbation of host cellular process catabolic process proteolysis involved in protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process cellular process macromolecule metabolic process protein metabolic process symbiont-mediated perturbation of host cellular process effector-mediated perturbation of host defenses by symbiont biological process involved in interspecies interaction between organisms symbiont-mediated activation of host programmed cell death response to stimulus response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated suppression of host immune response symbiont-mediated perturbation of host process symbiont-mediated suppression of host innate immune response effector-mediated perturbation of host process by symbiont symbiont-mediated perturbation of host innate immune response effector-mediated activation of host programmed cell death by symbiont response to host response to external biotic stimulus modulation of process of another organism symbiont-mediated perturbation of host defense response response to other organism symbiont-mediated perturbation of host programmed cell death symbiont-mediated perturbation of host immune response effector-mediated suppression of host innate immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host effector-mediated perturbation of host innate immune response by symbiont effector-mediated suppression of host defense response protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal symbiont-mediated suppression of host programmed cell death	cellular anatomical structure extracellular region host cellular component host intracellular part host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR040460	Gasdermin, pore forming domain	Domain
B	IPR041263	Gasdermin, PUB domain	Domain
B	IPR007677	Gasdermin	Family
A	IPR051071	Leucine-rich repeat-containing bacterial E3 ubiquitin ligases	Family
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR001611	Leucine-rich repeat	Repeat
A	IPR032674	LRR-containing bacterial E3 ligase, N-terminal	Domain
A	IPR029487	Novel E3 ligase domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: Q8TAX9	ulcerative colitis Crohn disease asthma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis systemic sclerosis acute lymphoblastic leukemia atrial fibrillation large cell medulloblastoma malignant ependymoma malignant pancreatic neoplasm pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma rheumatoid arthritis allergic rhinitis ulcerative colitis Crohn disease asthma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis systemic sclerosis acute lymphoblastic leukemia atrial fibrillation large cell medulloblastoma malignant ependymoma malignant pancreatic neoplasm pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma rheumatoid arthritis allergic rhinitis atypical teratoid rhabdoid tumor esophageal adenocarcinoma lung adenocarcinoma malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm primary biliary cholangitis systemic lupus erythematosus cervical cancer glioblastoma lung carcinoma Malignant neoplasm of breast pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.