7W0A
dmDicer2-LoqsPD-dsRNA Dimer status
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, H [auth E] | PF00636 | Ribonuclease III domain (Ribonuclease_3) | Ribonuclease III domain | - | Family |
A, H [auth E] | PF02170 | PAZ domain (PAZ) | PAZ domain | This domain is named PAZ after the proteins Piwi Argonaut and Zwille. This domain is found in two families of proteins that are involved in post-transcriptional gene silencing. These are the Piwi family and the Dicer family, that includes the Carpel ... | Domain |
A, H [auth E] | PF00270 | DEAD/DEAH box helicase (DEAD) | DEAD/DEAH box helicase | Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ... | Domain |
A, H [auth E] | PF00271 | Helicase conserved C-terminal domain (Helicase_C) | Helicase conserved C-terminal domain | The Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase. | Domain |
A, H [auth E] | PF00035 | Double-stranded RNA binding motif (dsrm) | Double-stranded RNA binding motif | Sequences gathered for seed by HMM_iterative_training Putative motif shared by proteins that bind to dsRNA. At least some DSRM proteins seem to bind to specific RNA targets. Exemplified by Staufen, which is involved in localisation of at least five d ... | Domain |
A, H [auth E] | PF20931 | Dicer, platform domain (Dicer_platform) | Dicer, platform domain | This domain is found in Endoribonuclease Dicer from chordates. This dsRNA endoribonuclease is involved in the cleavage of long RNA precursors into short dsRNAs and plays a role in gene silencing. Dicer shows two N-terminal helicase domains (Pfam:PF04 ... | Domain |
A, H [auth E] | PF03368 | Dicer dimerisation domain (Dicer_dimer) | Dicer dimerisation domain | This domain is found in members of the Dicer protein family which function in RNA interference, an evolutionarily conserved mechanism for gene silencing using double-stranded RNA (dsRNA) molecules. It is essential for the activity of Dicer [1,2]. It ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, H [auth E] | IPR000999 | Ribonuclease III domain | Domain |
A, H [auth E] | IPR011545 | DEAD/DEAH box helicase domain | Domain |
A, H [auth E] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A, H [auth E] | IPR001650 | Helicase, C-terminal domain-like | Domain |
A, H [auth E] | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
A, H [auth E] | IPR005034 | Dicer dimerisation domain | Domain |
A, H [auth E] | IPR003100 | PAZ domain | Domain |
A, H [auth E] | IPR048512 | Dicer, platform domain | Domain |
A, H [auth E] | IPR036389 | Ribonuclease III, endonuclease domain superfamily | Homologous Superfamily |
A, H [auth E] | IPR014720 | Double-stranded RNA-binding domain | Domain |
A, H [auth E] | IPR038248 | Dicer dimerisation domain superfamily | Homologous Superfamily |
B, E [auth F] | IPR014720 | Double-stranded RNA-binding domain | Domain |