7VYW
Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Chromo domain-like | 8106633 | 3000161 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00385 | Chromo (CHRromatin Organisation MOdifier) domain (Chromo) | Chromo (CHRromatin Organisation MOdifier) domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023780 | Chromo domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR023779 | Chromo domain, conserved site | Conserved Site | |
IPR044251 | Chromo domain-containing protein LHP1 | Family | |
IPR008251 | Chromo shadow domain | Domain | |
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR017984 | Chromo domain subgroup | Domain |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
M3L | Parent Component: LYS :  AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 | |
PCA | Parent Component: GLN :  AA0074 , AA0031 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 , 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420 |