7VY2
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES DIMER
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| HA [auth l] | SCOP2 Family | Bacterial photosystem II reaction centre L and M subunits | 8107141 | 4002035 | SCOP2 (2022-06-29) |
| HA [auth l] | SCOP2 Superfamily | Bacterial photosystem II reaction centre L and M subunits | 8107142 | 3000736 | SCOP2 (2022-06-29) |
| IA [auth m] | SCOP2 Family | Bacterial photosystem II reaction centre L and M subunits | 8107145 | 4002035 | SCOP2 (2022-06-29) |
| IA [auth m] | SCOP2 Superfamily | Bacterial photosystem II reaction centre L and M subunits | 8107146 | 3000736 | SCOP2 (2022-06-29) |
| I [auth G] | SCOP2 Family | Light-harvesting complex subunits | 8107143 | 4003043 | SCOP2 (2022-06-29) |
| I [auth G] | SCOP2 Superfamily | Light-harvesting complex subunits | 8107144 | 3000199 | SCOP2 (2022-06-29) |
| FA [auth X] | SCOP2 Family | PufX membrane protein | 8107139 | 4005146 | SCOP2 (2022-06-29) |
| FA [auth X] | SCOP2 Superfamily | PufX membrane protein-like | 8107140 | 3002563 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | PF00124 | e7vy2L1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00124 | ECOD (1.6) |
| HA [auth l] | PF00124 | e7vy2l1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00124 | ECOD (1.6) |
| B [auth M] | PF00124 | e7vy2M1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00124 | ECOD (1.6) |
| IA [auth m] | PF00124 | e7vy2m1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00124 | ECOD (1.6) |
| C [auth H] | PF03967,PF05239 | e7vy2H2 | A: beta barrels | X: SH3 | H: PRC-barrel domain (From Topology) | T: PRC-barrel domain | F: PF03967,PF05239 | ECOD (1.6) |
| C [auth H] | PF03967 | e7vy2H1 | A: extended segments | X: Photosystem II reaction centre subunit H, transmembrane region (From Topology) | H: Photosystem II reaction centre subunit H, transmembrane region (From Topology) | T: Photosystem II reaction centre subunit H, transmembrane region | F: PF03967 | ECOD (1.6) |
| JA [auth h] | PF03967,PF05239 | e7vy2h1 | A: beta barrels | X: SH3 | H: PRC-barrel domain (From Topology) | T: PRC-barrel domain | F: PF03967,PF05239 | ECOD (1.6) |
| JA [auth h] | PF03967 | e7vy2h2 | A: extended segments | X: Photosystem II reaction centre subunit H, transmembrane region (From Topology) | H: Photosystem II reaction centre subunit H, transmembrane region (From Topology) | T: Photosystem II reaction centre subunit H, transmembrane region | F: PF03967 | ECOD (1.6) |
| AB [auth v] | PF00556 | e7vy2v1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| BA [auth 5] | PF00556 | e7vy251 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| CB [auth y] | PF00556 | e7vy2y1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| D [auth A] | PF00556 | e7vy2A1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| DA [auth 7] | PF00556 | e7vy271 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| EB [auth 01] | PF00556 | e7vy2011 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| F [auth D] | PF00556 | e7vy2D1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| GB [auth 03] | PF00556 | e7vy2031 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| H [auth F] | PF00556 | e7vy2F1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| IB [auth 05] | PF00556 | e7vy2051 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| J [auth I] | PF00556 | e7vy2I1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| KA [auth a] | PF00556 | e7vy2a1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| KB [auth 07] | PF00556 | e7vy2071 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| L [auth K] | PF00556 | e7vy2K1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| MA [auth d] | PF00556 | e7vy2d1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| N [auth O] | PF00556 | e7vy2O1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| OA [auth f] | PF00556 | e7vy2f1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| P [auth Q] | PF00556 | e7vy2Q1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| QA [auth i] | PF00556 | e7vy2i1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| R [auth S] | PF00556 | e7vy2S1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| SA [auth k] | PF00556 | e7vy2k1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| T [auth V] | PF00556 | e7vy2V1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| UA [auth o] | PF00556 | e7vy2o1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| V [auth Y] | PF00556 | e7vy2Y1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| WA [auth q] | PF00556 | e7vy2q1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| X [auth 1] | PF00556 | e7vy211 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| YA [auth s] | PF00556 | e7vy2s1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| Z [auth 3] | PF00556 | e7vy231 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| AA [auth 4] | PF00556 | e7vy241 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| BB [auth w] | PF00556 | e7vy2w1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| CA [auth 6] | PF00556 | e7vy261 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| DB [auth z] | PF00556 | e7vy2z1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| E [auth B] | PF00556 | e7vy2B1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| EA [auth 8] | PF00556 | e7vy281 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| FB [auth 02] | PF00556 | e7vy2021 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| G [auth E] | PF00556 | e7vy2E1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| HB [auth 04] | PF00556 | e7vy2041 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| I [auth G] | PF00556 | e7vy2G1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| JB [auth 06] | PF00556 | e7vy2061 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| K [auth J] | PF00556 | e7vy2J1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| LA [auth b] | PF00556 | e7vy2b1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| LB [auth 08] | PF00556 | e7vy2081 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| M [auth N] | PF00556 | e7vy2N1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| NA [auth e] | PF00556 | e7vy2e1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| O [auth P] | PF00556 | e7vy2P1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| PA [auth g] | PF00556 | e7vy2g1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| Q [auth R] | PF00556 | e7vy2R1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| RA [auth j] | PF00556 | e7vy2j1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| S [auth T] | PF00556 | e7vy2T1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| TA [auth n] | PF00556 | e7vy2n1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| U [auth W] | PF00556 | e7vy2W1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| VA [auth p] | PF00556 | e7vy2p1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| W [auth Z] | PF00556 | e7vy2Z1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| XA [auth r] | PF00556 | e7vy2r1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| Y [auth 2] | PF00556 | e7vy221 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| ZA [auth t] | PF00556 | e7vy2t1 | A: extended segments | X: Bacterial light-harvesting complex subunits (From Topology) | H: Bacterial light-harvesting complex subunits (From Topology) | T: Bacterial light-harvesting complex subunits | F: PF00556 | ECOD (1.6) |
| FA [auth X] | PF11511 | e7vy2X1 | A: extended segments | X: Intrinsic membrane protein pufX (From Topology) | H: Intrinsic membrane protein pufX (From Topology) | T: Intrinsic membrane protein pufX | F: PF11511 | ECOD (1.6) |
| MB [auth x] | PF11511 | e7vy2x1 | A: extended segments | X: Intrinsic membrane protein pufX (From Topology) | H: Intrinsic membrane protein pufX (From Topology) | T: Intrinsic membrane protein pufX | F: PF11511 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth L], HA [auth l] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
| B [auth M], IA [auth m] | PF00124 | Photosynthetic reaction centre protein (Photo_RC) | Photosynthetic reaction centre protein | - | Family |
| C [auth H], JA [auth h] | PF03967 | Photosynthetic reaction centre, H-chain N-terminal region (PRCH) | Photosynthetic reaction centre, H-chain N-terminal region | - | Family |
| C [auth H], JA [auth h] | PF05239 | PRC-barrel domain (PRC) | PRC-barrel domain | The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ... | Domain |
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | - | Domain | |
| PF00556 | Antenna complex alpha/beta subunit (LHC) | Antenna complex alpha/beta subunit | - | Domain | |
| FA [auth X], MB [auth x] | PF11511 | Intrinsic membrane protein PufX (RhodobacterPufX) | Intrinsic membrane protein PufX | - | Family |
