7VPR | pdb_00007vpr

Crystal structure of the ligand-binding domain of C. glabrata Upc2 in complex with ergosterol

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	7tm_1	e7vprD1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: 7tm_1	ECOD (v294.1)
C	7tm_1	e7vprC1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: 7tm_1	ECOD (v294.1)
B	7tm_1	e7vprB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: 7tm_1	ECOD (v294.1)
A	7tm_1	e7vprA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: 7tm_1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF11951	Fungal specific transcription factor domain (Fungal_trans_2)	Fungal specific transcription factor domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Sterol uptake control protein 2 (Upc2)	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding cation binding transition metal ion binding zinc ion binding DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity	regulation of steroid biosynthetic process regulation of cellular process regulation of lipid metabolic process steroid metabolic process sterol metabolic process positive regulation of biological process lipid biosynthetic process alcohol metabolic process ergosterol biosynthetic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of biosynthetic process regulation of small molecule metabolic process positive regulation of lipid metabolic process regulation of steroid biosynthetic process regulation of cellular process regulation of lipid metabolic process steroid metabolic process sterol metabolic process positive regulation of biological process lipid biosynthetic process alcohol metabolic process ergosterol biosynthetic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of biosynthetic process regulation of small molecule metabolic process positive regulation of lipid metabolic process small molecule metabolic process ergosterol metabolic process steroid biosynthetic process positive regulation of cellular process regulation of biosynthetic process secondary alcohol biosynthetic process regulation of biological process regulation of alcohol biosynthetic process positive regulation of ergosterol biosynthetic process small molecule biosynthetic process regulation of steroid metabolic process regulation of ergosterol biosynthetic process biological regulation primary metabolic process phytosteroid biosynthetic process secondary alcohol metabolic process positive regulation of steroid biosynthetic process biosynthetic process sterol biosynthetic process positive regulation of lipid biosynthetic process regulation of sterol biosynthetic process alcohol biosynthetic process positive regulation of steroid metabolic process metabolic process cellular process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process regulation of metabolic process positive regulation of alcohol biosynthetic process positive regulation of sterol biosynthetic process lipid metabolic process regulation of localization transport positive regulation of sterol transport positive regulation of sterol import regulation of lipid transport organic hydroxy compound transport localization sterol transport sterol import regulation of sterol transport regulation of transport regulation of sterol import lipid localization lipid transport positive regulation of lipid localization establishment of localization positive regulation of lipid transport positive regulation of transport regulation of lipid localization macromolecule localization cellular response to stimulus cellular response to chemical stimulus response to stimulus response to chemical cellular response to xenobiotic stimulus response to xenobiotic stimulus response to nutrient levels regulation of response to nutrient levels regulation of growth regulation of filamentous growth of a population of unicellular organisms positive regulation of filamentous growth of a population of unicellular organisms filamentous growth of a population of unicellular organisms positive regulation of filamentous growth of a population of unicellular organisms in response to starvation positive regulation of response to stimulus response to stress regulation of response to stress regulation of filamentous growth response to starvation growth filamentous growth positive regulation of growth regulation of response to stimulus positive regulation of filamentous growth filamentous growth of a population of unicellular organisms in response to starvation regulation of filamentous growth of a population of unicellular organisms in response to starvation positive regulation of response to nutrient levels positive regulation of DNA-templated transcription RNA metabolic process positive regulation of macromolecule biosynthetic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of macromolecule metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription	cellular anatomical structure membrane intracellular anatomical structure perinuclear region of cytoplasm cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR021858	Fungal transcription factor	Family
A, B, C, D	IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	Homologous Superfamily
A, B, C, D	IPR001138	Zn(2)Cys(6) fungal-type DNA-binding domain	Domain
A, B, C, D	IPR053157	Sterol Uptake Control Transcription Regulator	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.