7VP5 | pdb_00007vp5

Structure of a transcription factor and DNA complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	UNK_F_TYPE	e7vp5I1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
J	UNK_F_TYPE	e7vp5J1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
F	UNK_F_TYPE	e7vp5F1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
E	UNK_F_TYPE	e7vp5E1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
B	UNK_F_TYPE	e7vp5B1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e7vp5A1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, E, F, I A, B, E, F, I, J	PF03634	TCP family transcription factor (TCP)	TCP family transcription factor	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, E, F, I A, B, E, F, I, J	Transcription factor TCP10	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process developmental process multicellular organismal process plant organ development plant organ senescence multicellular organism development anatomical structure development leaf development leaf senescence shoot system development phyllome development system development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
D, H, L	DNA (5'-D(APTPGPTPGPGPTPCPCPCPGPTPGPT)-3')	-	-	-
C, G, K	DNA (5'-D(APTPGPTPGPGPTPCPCPCPGPTPGPT)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, E, F, I A, B, E, F, I, J	IPR017887	Transcription factor TCP subgroup	Domain
A, B, E, F, I A, B, E, F, I, J	IPR005333	Transcription factor, TCP	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.