7VP3 | pdb_00007vp3

Structure of a transcription factor and DNA complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	UNK_F_TYPE	e7vp3P1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
O [auth N]	UNK_F_TYPE	e7vp3N1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
L	UNK_F_TYPE	e7vp3L1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
J [auth I]	UNK_F_TYPE	e7vp3I1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
H [auth G]	UNK_F_TYPE	e7vp3G1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
F [auth C]	UNK_F_TYPE	e7vp3C1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
D [auth J]	UNK_F_TYPE	e7vp3J1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)
B [auth D]	UNK_F_TYPE	e7vp3D1	A: alpha arrays	X: HTH	H: HTH	T: Ribbon-helix-helix	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], L, O [auth N], P	PF03634	TCP family transcription factor (TCP)	TCP family transcription factor	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth E], G [auth F], K, M	DNA (5'-D(APTPGPTPGPGPGPTPCPCPCPC)-3')	-	-	-
B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], L, O [auth N], P	Transcription factor TCP15	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	anthocyanin-containing compound biosynthetic process regulation of biosynthetic process pigment metabolic process flavonoid metabolic process regulation of biological process regulation of cellular process regulation of anthocyanin biosynthetic process biological regulation pigment biosynthetic process primary metabolic process regulation of primary metabolic process regulation of flavonoid biosynthetic process anthocyanin-containing compound metabolic process flavonoid biosynthetic process biosynthetic process anthocyanin-containing compound biosynthetic process regulation of biosynthetic process pigment metabolic process flavonoid metabolic process regulation of biological process regulation of cellular process regulation of anthocyanin biosynthetic process biological regulation pigment biosynthetic process primary metabolic process regulation of primary metabolic process regulation of flavonoid biosynthetic process anthocyanin-containing compound metabolic process flavonoid biosynthetic process biosynthetic process metabolic process cellular process regulation of metabolic process regulation of anthocyanin metabolic process rhythmic process circadian rhythm RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process cell division developmental process multicellular organismal process reproductive system development reproductive process developmental process involved in reproduction reproductive shoot system development multicellular organism development anatomical structure development reproductive structure development shoot system development post-embryonic development inflorescence development system development response to stimulus response to cytokinin response to hormone response to endogenous stimulus response to chemical floral whorl development flower development gynoecium development plant organ development stamen development stamen filament development phyllome development androecium development floral organ development DNA-templated DNA replication DNA endoreduplication cell cycle DNA replication DNA metabolic process DNA replication cell cycle cell cycle process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
A [auth B], E [auth A], I [auth H], N [auth O]	DNA (5'-D(TPGPGPGPGPAPCPCPCPAP*C)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], L, O [auth N], P	IPR017887	Transcription factor TCP subgroup	Domain
B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], B [auth D], D [auth J], F [auth C], H [auth G], J [auth I], L, O [auth N], P	IPR005333	Transcription factor, TCP	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.