7VOY | pdb_00007voy

Rba sphaeroides PufX-KO RC-LH1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KA [auth H]SCOP2B SuperfamilyPRC-barrel domain 8099396 3000637 SCOP2B (2022-06-29)
KA [auth H]SCOP2B SuperfamilyPhotosystem II reaction centre subunit H, transmembrane region 8100956 3000750 SCOP2B (2022-06-29)
JA [auth M]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8099400 3000736 SCOP2B (2022-06-29)
IA [auth L]SCOP2B SuperfamilyBacterial photosystem II reaction centre, L and M subunits 8099398 3000736 SCOP2B (2022-06-29)
Z [auth 8]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
V [auth Z]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
T [auth X]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
R [auth V]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
P [auth T]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
N [auth R]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
J [auth N]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
HA [auth 3]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
H [auth J]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
FA [auth 5]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
DA [auth t]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
BA [auth 0]SCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLight-harvesting complex subunits 8076353 3000199 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
KA [auth H]e7voyH1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
JA [auth M]e7voyM1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
IA [auth L]e7voyL1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Z [auth 8]e7voy81 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
X [auth 2]e7voy21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
V [auth Z]e7voyZ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
T [auth X]e7voyX1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
R [auth V]e7voyV1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
P [auth T]e7voyT1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
N [auth R]e7voyR1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
L [auth P]e7voyP1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
J [auth N]e7voyN1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
HA [auth 3]e7voy31 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
H [auth J]e7voyJ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
FA [auth 5]e7voy51 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
F [auth G]e7voyG1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
DA [auth t]e7voyt1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
D [auth E]e7voyE1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
BA [auth 0]e7voy01 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Be7voyB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Y [auth 7]e7voy71 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
W [auth 1]e7voy11 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
U [auth Y]e7voyY1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
S [auth W]e7voyW1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Q [auth U]e7voyU1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
O [auth S]e7voyS1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
M [auth Q]e7voyQ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
K [auth O]e7voyO1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
I [auth K]e7voyK1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
GA [auth C]e7voyC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
G [auth I]e7voyI1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
EA [auth 6]e7voy61 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
E [auth F]e7voyF1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
CA [auth 4]e7voy41 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
C [auth D]e7voyD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
AA [auth 9]e7voy91 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)
Ae7voyA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: PhnJF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
KA [auth H]PF03967Photosynthetic reaction centre, H-chain N-terminal region (PRCH)Photosynthetic reaction centre, H-chain N-terminal region- Family
KA [auth H]PF05239PRC-barrel domain (PRC)PRC-barrel domainThe PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].
Domain
JA [auth M]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
IA [auth L]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunitDomain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunitDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
KA [auth H]Reaction center protein H chain
JA [auth M]Reaction center protein M chain
IA [auth L]Reaction center protein L chain
Light-harvesting protein B-875 beta chain
Light-harvesting protein B-875 alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
KA [auth H]IPR014747Bacterial photosynthetic reaction centre, H-chain, C-terminalHomologous Superfamily
KA [auth H]IPR015810Photosynthetic reaction centre, H subunit, N-terminalDomain
KA [auth H]IPR005652Photosynthetic reaction centre, H subunitFamily
KA [auth H]IPR037097Photosynthetic reaction centre, H subunit, N-terminal domain superfamilyHomologous Superfamily
KA [auth H]IPR011033PRC-barrel-like superfamilyHomologous Superfamily
KA [auth H]IPR027275PRC-barrel domainDomain
JA [auth M]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
JA [auth M]IPR005781Photosynthetic reaction centre, M subunitFamily
JA [auth M]IPR000484Photosynthetic reaction centre, L/MFamily
JA [auth M]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
IA [auth L]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
IA [auth L]IPR000484Photosynthetic reaction centre, L/MFamily
IA [auth L]IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
IA [auth L]IPR005871Photosynthetic reaction centre, L subunitFamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR023623Antenna complex, beta subunit, conserved siteConserved Site
IPR002362Light-harvesting protein B beta chainFamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR018332Antenna complex, alpha subunitFamily
IPR002361Antenna complex, alpha subunit conserved siteConserved Site
IPR035889Light-harvesting complexHomologous Superfamily