7VIA | pdb_00007via

Focused refinement of asymmetric unit of bacteriophage lambda procapsid at 3.88 Angstrom


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyPhage coat protein-like 8106222 3001529 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhage_cap_Ee7viaA1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
BPhage_cap_Ee7viaB1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
CPhage_cap_Ee7viaC1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
DPhage_cap_Ee7viaD1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
EPhage_cap_Ee7viaE1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
FPhage_cap_Ee7viaF1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)
GPhage_cap_Ee7viaG1 A: a+b three layersX: Thioredoxin-likeH: Major capsid protein gp5 (From Topology)T: Major capsid protein gp5F: Phage_cap_EECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.1930.10 Alpha Beta 2-Layer Sandwich capsid protein of prophage fold capsid protein of prophage domainCATH (utative)
F3.30.1930.10 Alpha Beta 2-Layer Sandwich capsid protein of prophage fold capsid protein of prophage domainCATH (utative)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR005564Major capsid protein GpEFamily