7VCS | pdb_00007vcs

Human p97 double hexamer conformer II with ATPgammaS bound


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Le7vcsL1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ke7vcsK1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Je7vcsJ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ie7vcsI1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
He7vcsH1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ge7vcsG1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Fe7vcsF1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ee7vcsE1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
De7vcsD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ce7vcsC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Be7vcsB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Aminotran_3F:ECOD (20:10:01)
Ae7vcsA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Chlorophyllase2F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
L3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
L1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
L6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
K3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
K3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
K1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
K6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
J3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
J3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
J1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
J6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
I3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
I3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
I1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
I6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
H3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
H3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
H1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
H6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
G3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
G3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
G1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
G6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
F3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
F3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
F1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
F6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
E3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
E3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
E1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
E6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
D3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
D3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
D1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
D6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
C3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
C3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
C6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
B3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
B3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
B1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
B6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)
A3.10.330.10 Alpha Beta Roll Vcp-like ATPase Chain A, domain 2CATH (utative)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
A1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
A6.10.20.150 Special Helix non-globular Arc Repressor Mutant, subunit A CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02933Cell division protein 48 (CDC48), domain 2 (CDC48_2)Cell division protein 48 (CDC48), domain 2This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the C-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
A, B, C, D, E
PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
A, B, C, D, E
PF02359Cell division protein 48 (CDC48), N-terminal domain (CDC48_N)Cell division protein 48 (CDC48), N-terminal domainThis domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
A, B, C, D, E
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Transitional endoplasmic reticulum ATPase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR003959ATPase, AAA-type, coreDomain
A, B, C, D, E
IPR005938AAA ATPase, CDC48 familyFamily
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR029067CDC48 domain 2-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR003338CDC48, N-terminal subdomainDomain
A, B, C, D, E
IPR004201CDC48, domain 2Domain
A, B, C, D, E
IPR009010Aspartate decarboxylase-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003593AAA+ ATPase domainDomain
A, B, C, D, E
IPR041569AAA ATPase, AAA+ lid domainDomain
A, B, C, D, E
IPR050168AAA ATPase domain-containing proteinFamily
A, B, C, D, E
IPR003960ATPase, AAA-type, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B, C, D, E
PharosP55072