7V8N
Crystal structure of the PWWP-ARID domain of ARID4A
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08169 | e7v8nA2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF08169 | ECOD (1.6) |
A | PF01388 | e7v8nA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01388 | ECOD (1.6) |
B | PF08169 | e7v8nB2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF08169 | ECOD (1.6) |
B | PF01388 | e7v8nB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01388 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08169 | RBB1NT (NUC162) domain (RBB1NT) | RBB1NT (NUC162) domain | This domain is found N terminal to the ARID/BRIGHT domain in DNA-binding proteins of the Retinoblastoma-binding protein 1 family [1]. | Domain | |
PF01388 | ARID/BRIGHT DNA binding domain (ARID) | ARID/BRIGHT DNA binding domain | This domain is know as ARID for AT-Rich Interaction Domain [1], and also known as the BRIGHT domain [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002999 | Tudor domain | Domain | |
IPR016197 | Chromo-like domain superfamily | Homologous Superfamily | |
IPR047473 | ARID4A, chromo barrel domain | Domain | |
IPR001606 | ARID DNA-binding domain | Domain | |
IPR012603 | ARID4A/B, PWWP domain | Domain | |
IPR000953 | Chromo/chromo shadow domain | Domain | |
IPR025995 | RNA binding activity-knot of a chromodomain | Domain | |
IPR036431 | ARID DNA-binding domain superfamily | Homologous Superfamily | |
IPR047472 | ARID4A, first Tudor domain | Domain |