Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyWD40 repeat-like8052531 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyWD40 repeat-like8051194 3001694 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyWD40 repeat-like8052530 3001694 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyWD40 repeat-like8052531 3001694 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUracil-DNA glycosylase-like8042482 3001106 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyUracil-DNA glycosylase-like8042482 3001106 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF03178,PF10433e7v7cB1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
BPF10433e7v7cB3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
BPF03178e7v7cB2 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
FPF03178,PF10433e7v7cF3 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF03178,PF10433ECOD (1.6)
FPF10433e7v7cF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF10433ECOD (1.6)
FPF03178e7v7cF4 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF03178ECOD (1.6)
CPF00522e7v7cC1 A: alpha bundlesX: Viral accessory protein x (Vpx) / viral protein r (Vpr) (From Topology)H: Viral accessory protein x (Vpx) / viral protein r (Vpr) (From Topology)T: Viral accessory protein x (Vpx) / viral protein r (Vpr)F: PF00522ECOD (1.6)
GPF00522e7v7cG1 A: alpha bundlesX: Viral accessory protein x (Vpx) / viral protein r (Vpr) (From Topology)H: Viral accessory protein x (Vpx) / viral protein r (Vpr) (From Topology)T: Viral accessory protein x (Vpx) / viral protein r (Vpr)F: PF00522ECOD (1.6)
DPF03167e7v7cD1 A: a/b three-layered sandwichesX: Uracil-DNA glycosylase-like (From Topology)H: Uracil-DNA glycosylase-like (From Topology)T: Uracil-DNA glycosylase-likeF: PF03167ECOD (1.6)
HPF03167e7v7cH1 A: a/b three-layered sandwichesX: Uracil-DNA glycosylase-like (From Topology)H: Uracil-DNA glycosylase-like (From Topology)T: Uracil-DNA glycosylase-likeF: PF03167ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, F
PF10433Mono-functional DNA-alkylating methyl methanesulfonate N-term (MMS1_N)Mono-functional DNA-alkylating methyl methanesulfonate N-term- Repeat
B, F
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
C, G
PF00522VPR/VPX protein (VPR)VPR/VPX protein- Family
D, H
PF03167Uracil DNA glycosylase superfamily (UDG)Uracil DNA glycosylase superfamily- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E
DDB1- and CUL4-associated factor 1
B, F
DNA damage-binding protein 1
C, G
Protein Vpr-
D, H
Uracil-DNA glycosylase