7V3U

Cryo-EM structure of MCM double hexamer with structured Mcm4-NSD


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 2]PF17207e7v3u24 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
A [auth 2]PF17855e7v3u21 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
A [auth 2]PF14551e7v3u25 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
A [auth 2]PF00493e7v3u22 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
A [auth 2]F_UNCLASSIFIEDe7v3u23 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
G [auth B]PF17207e7v3uB3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
G [auth B]PF17855e7v3uB1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
G [auth B]PF14551e7v3uB4 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
G [auth B]PF00493e7v3uB5 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
G [auth B]F_UNCLASSIFIEDe7v3uB2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
B [auth 3]PF17207e7v3u33 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
B [auth 3]PF17855e7v3u32 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
B [auth 3]PF14551e7v3u31 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
B [auth 3]PF00493e7v3u35 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
B [auth 3]F_UNCLASSIFIEDe7v3u34 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
H [auth C]PF17207e7v3uC5 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
H [auth C]PF17855e7v3uC3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
H [auth C]PF14551e7v3uC1 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
H [auth C]PF00493e7v3uC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
H [auth C]F_UNCLASSIFIEDe7v3uC4 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
C [auth 4]PF17207e7v3u41 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
C [auth 4]PF17855e7v3u43 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
C [auth 4]PF14551e7v3u42 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
C [auth 4]PF00493e7v3u45 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
C [auth 4]PF17207e7v3u44 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
I [auth D]PF17207e7v3uD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
I [auth D]PF17855e7v3uD1 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
I [auth D]PF14551e7v3uD5 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
I [auth D]PF00493e7v3uD4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
I [auth D]PF17207e7v3uD3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
E [auth 6]PF17207e7v3u64 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
E [auth 6]PF17855e7v3u61 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
E [auth 6]PF14551e7v3u65 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
E [auth 6]PF00493e7v3u62 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
E [auth 6]PF17207e7v3u63 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
K [auth F]PF17207e7v3uF4 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
K [auth F]PF17855e7v3uF3 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
K [auth F]PF14551e7v3uF2 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
K [auth F]PF00493e7v3uF5 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
K [auth F]PF17207e7v3uF1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF17207ECOD (1.6)
F [auth 7]PF17207e7v3u73 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
F [auth 7]PF17855e7v3u72 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
F [auth 7]PF14551e7v3u74 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
F [auth 7]PF00493e7v3u71 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
F [auth 7]F_UNCLASSIFIEDe7v3u75 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)
L [auth G]PF17207e7v3uG2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF17207ECOD (1.6)
L [auth G]PF17855e7v3uG5 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: PF17855ECOD (1.6)
L [auth G]PF14551e7v3uG4 A: a+b complex topologyX: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology)T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54)F: PF14551ECOD (1.6)
L [auth G]PF00493e7v3uG3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00493ECOD (1.6)
L [auth G]F_UNCLASSIFIEDe7v3uG1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2],
G [auth B]
PF12619Mini-chromosome maintenance protein 2 (MCM2_N)Mini-chromosome maintenance protein 2- Family
A [auth 2],
G [auth B]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
A [auth 2],
G [auth B]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
A [auth 2],
G [auth B]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
A [auth 2],
G [auth B]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
B [auth 3],
H [auth C]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
B [auth 3],
H [auth C]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
B [auth 3],
H [auth C]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
B [auth 3],
H [auth C]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
C [auth 4],
I [auth D]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
C [auth 4],
I [auth D]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
C [auth 4],
I [auth D]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
C [auth 4],
I [auth D]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
D [auth 5],
J [auth E]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
D [auth 5],
J [auth E]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
D [auth 5],
J [auth E]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
E [auth 6],
K [auth F]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
E [auth 6],
K [auth F]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
E [auth 6],
K [auth F]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
E [auth 6],
K [auth F]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain
F [auth 7],
L [auth G]
PF14551MCM N-terminal domain (MCM_N)MCM N-terminal domainThis family contains the N-terminal domain of MCM proteins.Domain
F [auth 7],
L [auth G]
PF00493MCM P-loop domain (MCM)MCM P-loop domain- Domain
F [auth 7],
L [auth G]
PF17855MCM AAA-lid domain (MCM_lid)MCM AAA-lid domainThis entry represents the AAA-lid domain found in MCM proteins.Domain
F [auth 7],
L [auth G]
PF17207MCM OB domain (MCM_OB)MCM OB domainThis family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2],
G [auth B]
DNA replication licensing factor MCM2
B [auth 3],
H [auth C]
DNA replication licensing factor MCM3
C [auth 4],
I [auth D]
DNA replication licensing factor MCM4
D [auth 5],
J [auth E]
Minichromosome maintenance protein 5
E [auth 6],
K [auth F]
DNA replication licensing factor MCM6
F [auth 7],
L [auth G]
DNA replication licensing factor MCM7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2],
G [auth B]
IPR031327Mini-chromosome maintenance proteinFamily
A [auth 2],
G [auth B]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
A [auth 2],
G [auth B]
IPR001208MCM domainDomain
A [auth 2],
G [auth B]
IPR041562MCM, AAA-lid domainDomain
A [auth 2],
G [auth B]
IPR008045DNA replication licensing factor Mcm2Family
A [auth 2],
G [auth B]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth 2],
G [auth B]
IPR027925MCM, N-terminal domainDomain
A [auth 2],
G [auth B]
IPR033762MCM OB domainDomain
A [auth 2],
G [auth B]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
B [auth 3],
H [auth C]
IPR031327Mini-chromosome maintenance proteinFamily
B [auth 3],
H [auth C]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
B [auth 3],
H [auth C]
IPR003593AAA+ ATPase domainDomain
B [auth 3],
H [auth C]
IPR001208MCM domainDomain
B [auth 3],
H [auth C]
IPR041562MCM, AAA-lid domainDomain
B [auth 3],
H [auth C]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth 3],
H [auth C]
IPR027925MCM, N-terminal domainDomain
B [auth 3],
H [auth C]
IPR008046DNA replication licensing factor Mcm3Family
B [auth 3],
H [auth C]
IPR033762MCM OB domainDomain
B [auth 3],
H [auth C]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth 4],
I [auth D]
IPR031327Mini-chromosome maintenance proteinFamily
C [auth 4],
I [auth D]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
C [auth 4],
I [auth D]
IPR001208MCM domainDomain
C [auth 4],
I [auth D]
IPR041562MCM, AAA-lid domainDomain
C [auth 4],
I [auth D]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth 4],
I [auth D]
IPR027925MCM, N-terminal domainDomain
C [auth 4],
I [auth D]
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
C [auth 4],
I [auth D]
IPR008047Mini-chromosome maintenance complex protein 4Family
C [auth 4],
I [auth D]
IPR033762MCM OB domainDomain
C [auth 4],
I [auth D]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth 5],
J [auth E]
IPR031327Mini-chromosome maintenance proteinFamily
D [auth 5],
J [auth E]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
D [auth 5],
J [auth E]
IPR001208MCM domainDomain
D [auth 5],
J [auth E]
IPR041562MCM, AAA-lid domainDomain
D [auth 5],
J [auth E]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth 5],
J [auth E]
IPR027925MCM, N-terminal domainDomain
D [auth 5],
J [auth E]
IPR033762MCM OB domainDomain
D [auth 5],
J [auth E]
IPR008048DNA replication licensing factor Mcm5Family
D [auth 5],
J [auth E]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth 6],
K [auth F]
IPR008049DNA replication licensing factor Mcm6Family
E [auth 6],
K [auth F]
IPR041024Mcm6, C-terminal winged-helix domainDomain
E [auth 6],
K [auth F]
IPR031327Mini-chromosome maintenance proteinFamily
E [auth 6],
K [auth F]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
E [auth 6],
K [auth F]
IPR001208MCM domainDomain
E [auth 6],
K [auth F]
IPR041562MCM, AAA-lid domainDomain
E [auth 6],
K [auth F]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth 6],
K [auth F]
IPR027925MCM, N-terminal domainDomain
E [auth 6],
K [auth F]
IPR033762MCM OB domainDomain
E [auth 6],
K [auth F]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
F [auth 7],
L [auth G]
IPR031327Mini-chromosome maintenance proteinFamily
F [auth 7],
L [auth G]
IPR008050DNA replication licensing factor Mcm7Family
F [auth 7],
L [auth G]
IPR018525Mini-chromosome maintenance, conserved siteConserved Site
F [auth 7],
L [auth G]
IPR003593AAA+ ATPase domainDomain
F [auth 7],
L [auth G]
IPR001208MCM domainDomain
F [auth 7],
L [auth G]
IPR041562MCM, AAA-lid domainDomain
F [auth 7],
L [auth G]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth 7],
L [auth G]
IPR027925MCM, N-terminal domainDomain
F [auth 7],
L [auth G]
IPR033762MCM OB domainDomain
F [auth 7],
L [auth G]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily