7V25 | pdb_00007v25

Crystal Structure of phthalate dioxygenase in complex with phthalate


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FRieskee7v25F2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
FF_UNCLASSIFIEDe7v25F1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)
ERieskee7v25E2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
EF_UNCLASSIFIEDe7v25E1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)
DRieskee7v25D2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
DF_UNCLASSIFIEDe7v25D1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)
CRieskee7v25C2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
CF_UNCLASSIFIEDe7v25C1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)
B [auth A]Rieskee7v25A2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
B [auth A]F_UNCLASSIFIEDe7v25A1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)
A [auth B]Rieskee7v25B2 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: RieskeECOD (1.6)
A [auth B]F_UNCLASSIFIEDe7v25B1 A: a+b two layersX: TBP-likeH: Bet v1-like (From Topology)T: Bet v1-likeF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
F3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
E3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)
D2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
D3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)
C2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
C3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)
B [auth A]2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
B [auth A]3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)
A [auth B]2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (utative)
A [auth B]3.90.380.10 Alpha Beta Alpha-Beta Complex Naphthalene 1,2-dioxygenase Alpha Subunit Chain A, domain 1CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF19301LigXa C-terminal domain like (LigXa_C)LigXa C-terminal domain likeThis entry represents the C-terminal domain of a Rieske oxygenase enzyme. This entry includes the 5,5'-dehydrodivanillate O-demethylase three-component monooxygenase which is composed of an oxygenase (LigXa) in this entry, a ferredoxin (LigXc) and a ...This entry represents the C-terminal domain of a Rieske oxygenase enzyme. This entry includes the 5,5'-dehydrodivanillate O-demethylase three-component monooxygenase which is composed of an oxygenase (LigXa) in this entry, a ferredoxin (LigXc) and a ferredoxin reductase (LigXd) [1].
Domain
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain