7V0K

Consensus refinement of human erythrocyte ankyrin-1 complex (Composite map)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth O]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
I [auth O]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
J [auth P]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
J [auth P]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth X]PF00868e7v0kX4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00868ECOD (1.6)
F [auth X]PF00927e7v0kX2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00927ECOD (1.6)
F [auth X]PF01841e7v0kX1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: PF01841ECOD (1.6)
A [auth K]PF00909e7v0kK1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
B [auth L]PF00909e7v0kL1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
C [auth Q]PF00909e7v0kQ1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
D [auth H]PF00023e7v0kH2 A: alpha superhelicesX: Repetitive alpha hairpinsH: Ankyrin repeat (From Topology)T: Ankyrin repeatF: PF00023ECOD (1.6)
D [auth H]PF13637e7v0kH1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Ankyrin repeat (From Topology)T: Ankyrin repeatF: PF13637ECOD (1.6)
I [auth O]PF00955e7v0kO1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
I [auth O]PF07565e7v0kO2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
J [auth P]PF00955e7v0kP1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
J [auth P]PF07565e7v0kP2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
G [auth N]PF01102e7v0kN1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
H [auth D]PF01102e7v0kD1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth X]PF00868Transglutaminase family (Transglut_N)Transglutaminase family- Domain
F [auth X]PF00927Transglutaminase family, C-terminal ig like domain (Transglut_C)Transglutaminase family, C-terminal ig like domain- Domain
F [auth X]PF01841Transglutaminase-like superfamily (Transglut_core)Transglutaminase-like superfamily- Family
A [auth K]PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
B [auth L],
C [auth Q]
PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
D [auth H]PF00023Ankyrin repeat (Ank)Ankyrin repeat- Repeat
E [auth W],
I [auth O],
J [auth P]
PF00955HCO3- transporter family (HCO3_cotransp)HCO3- transporter family- Family
E [auth W],
I [auth O],
J [auth P]
PF07565Band 3 cytoplasmic domain (Band_3_cyto)Band 3 cytoplasmic domainThis family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic ...This family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic domain of band 3 functions primarily as an anchoring site for other membrane-associated proteins. Included among the protein ligands of cdb3 are ankyrin, protein 4.2, protein 4.1, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), phosphofructokinase, aldolase, hemoglobin, hemichromes, and the protein tyrosine kinase (p72syk). [1]
Domain
G [auth N],
H [auth D]
PF01102Glycophorin A (Glycophorin_A)Glycophorin A- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth X]Protein 4.2
A [auth K]Blood group Rh(CE) polypeptide
B [auth L],
C [auth Q]
Ammonium transporter Rh type A
D [auth H]Ankyrin-1
E [auth W],
I [auth O],
J [auth P]
Band 3 anion transport protein
G [auth N],
H [auth D]
Glycophorin-A -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth X]IPR036985Transglutaminase-like superfamilyHomologous Superfamily
F [auth X]IPR036238Transglutaminase, C-terminal domain superfamilyHomologous Superfamily
F [auth X]IPR013808Transglutaminase, active siteActive Site
F [auth X]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth X]IPR002931Transglutaminase-likeDomain
F [auth X]IPR014756Immunoglobulin E-setHomologous Superfamily
F [auth X]IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
F [auth X]IPR001102Transglutaminase, N-terminalDomain
F [auth X]IPR008958Transglutaminase, C-terminalDomain
F [auth X]IPR023608Protein-glutamine gamma-glutamyltransferase, animalFamily
A [auth K]IPR002229Blood group Rhesus C/E/D polypeptideFamily
A [auth K]IPR029020Ammonium/urea transporterHomologous Superfamily
A [auth K]IPR024041Ammonium transporter AmtB-like domainDomain
B [auth L],
C [auth Q]
IPR002229Blood group Rhesus C/E/D polypeptideFamily
B [auth L],
C [auth Q]
IPR029020Ammonium/urea transporterHomologous Superfamily
B [auth L],
C [auth Q]
IPR024041Ammonium transporter AmtB-like domainDomain
D [auth H]IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
D [auth H]IPR040745Ankyrin, UPA domainDomain
D [auth H]IPR000906ZU5 domainDomain
D [auth H]IPR002110Ankyrin repeatRepeat
D [auth H]IPR011029Death-like domain superfamilyHomologous Superfamily
D [auth H]IPR000488Death domainDomain
E [auth W],
I [auth O],
J [auth P]
IPR013769Band 3 cytoplasmic domainDomain
E [auth W],
I [auth O],
J [auth P]
IPR001717Anion exchange proteinFamily
E [auth W],
I [auth O],
J [auth P]
IPR003020Bicarbonate transporter, eukaryoticFamily
E [auth W],
I [auth O],
J [auth P]
IPR011531Bicarbonate transporter-like, transmembrane domainDomain
E [auth W],
I [auth O],
J [auth P]
IPR002977Anion exchange protein 1Family
E [auth W],
I [auth O],
J [auth P]
IPR016152Phosphotransferase/anion transporterHomologous Superfamily
E [auth W],
I [auth O],
J [auth P]
IPR018241Anion exchange, conserved siteConserved Site
G [auth N],
H [auth D]
IPR018938Glycophorin, conserved siteConserved Site
G [auth N],
H [auth D]
IPR001195GlycophorinFamily
G [auth N],
H [auth D]
IPR049535Glycophorin A/BFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
F [auth X]PharosP16452
A [auth K]PharosP18577
B [auth L],
C [auth Q]
PharosQ02094
D [auth H]PharosP16157
E [auth W],
I [auth O],
J [auth P]
PharosP02730
G [auth N],
H [auth D]
PharosP02724