Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyRoadblock/LC7 domain-like8093374 3001810 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRas-like P-loop GTPases8093372 3002022 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRas-like P-loop GTPases8093372 3002022 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRoadblock/LC7 domain-like8093374 3001810 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRas-like P-loop GTPases8093371 3002022 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRas-like P-loop GTPases8093371 3002022 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyRoadblock/LC7 domain-like8088845 3001810 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRoadblock/LC7 domain-like8088845 3001810 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRoadblock/LC7 domain-like8040242 3001810 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRoadblock/LC7 domain-like8040242 3001810 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRoadblock/LC7 domain-like8092495 3001810 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRoadblock/LC7 domain-like8092495 3001810 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00400e7ux2A2 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
APF02985e7ux2A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF02985ECOD (1.6)
APF14538e7ux2A3 A: a/b three-layered sandwichesX: Caspase-like (From Topology)H: Caspase-like (From Topology)T: Caspase-likeF: PF14538ECOD (1.6)
BPF04670e7ux2B1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04670ECOD (1.6)
BPF04670e7ux2B2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF04670ECOD (1.6)
IPF04670e7ux2I1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04670ECOD (1.6)
IPF04670e7ux2I2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF04670ECOD (1.6)
CPF04670e7ux2C1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04670ECOD (1.6)
CPF04670e7ux2C2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF04670ECOD (1.6)
JPF04670e7ux2J1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04670ECOD (1.6)
JPF04670e7ux2J2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF04670ECOD (1.6)
LPF03259e7ux2L1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF03259ECOD (1.6)
EPF03259e7ux2E1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF03259ECOD (1.6)
FPF08923e7ux2F1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF08923ECOD (1.6)
MPF08923e7ux2M1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF08923ECOD (1.6)
GF_UNCLASSIFIEDe7ux2G1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: F_UNCLASSIFIEDECOD (1.6)
NF_UNCLASSIFIEDe7ux2N1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: F_UNCLASSIFIEDECOD (1.6)
HPF16672e7ux2H1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF16672ECOD (1.6)
OPF16672e7ux2O1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF16672ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF14538Raptor N-terminal CASPase like domain (Raptor_N)Raptor N-terminal CASPase like domainThis domain is found at the N-terminus of the Raptor protein. It has been identified to have a CASPase like structure [1]. It conserves the characteristic cys/his dyad of the caspases suggesting it may have a peptidase activity.Domain
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF02985HEAT repeat (HEAT)HEAT repeat- Repeat
B, I
PF04670Gtr1/RagA G protein conserved region (Gtr1_RagA)Gtr1/RagA G protein conserved regionGTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].
Domain
C, J
PF04670Gtr1/RagA G protein conserved region (Gtr1_RagA)Gtr1/RagA G protein conserved regionGTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of ...GTR1 was first identified in S. cerevisiae as a suppressor of a mutation in RCC1. Biochemical analysis revealed that Gtr1 is in fact a G protein of the Ras family. The RagA/B proteins are the human homologues of Gtr1. Included in this family is the human Rag C, a novel protein that has been shown to interact with RagA/B [1,2,3,4].
Domain
D, K
PF15454Late endosomal/lysosomal adaptor and MAPK and MTOR activator (LAMTOR)Late endosomal/lysosomal adaptor and MAPK and MTOR activator- Family
E, L
PF03259Roadblock/LC7 domain (Robl_LC7)Roadblock/LC7 domainThis family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.
Domain
F, M
PF08923Mitogen-activated protein kinase kinase 1 interacting (MAPKK1_Int)Mitogen-activated protein kinase kinase 1 interactingMitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a tw ...Mitogen-activated protein kinase kinase 1 interacting protein is a small subcellular adaptor protein required for MAPK signaling and ERK1/2 activation. The overall topology of this domain has a central five-stranded beta-sheet sandwiched between a two alpha-helix and a one alpha-helix layer [1].
Domain
H, O
PF16672Ragulator complex protein LAMTOR5 (LAMTOR5)Ragulator complex protein LAMTOR5- Domain
PF15951MITF/TFEB/TFEC/TFE3 N-terminus (MITF_TFEB_C_3_N)MITF/TFEB/TFEC/TFE3 N-terminus- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Regulatory-associated protein of mTOR
B, I
Ras-related GTP-binding protein A
C, J
Ras-related GTP-binding protein C
D, K
Ragulator complex protein LAMTOR1
E, L
Ragulator complex protein LAMTOR2
F, M
Ragulator complex protein LAMTOR3
G, N
Ragulator complex protein LAMTOR4-
H, O
Ragulator complex protein LAMTOR5-
Transcription factor EB