7USY | pdb_00007usy

Structure of C. elegans TMC-1 complex with ARRD-6


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth J]RNA_pol_Rpb1_5e7usyJ01 A: alpha bundlesX: Rossmann-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: RNA_pol_Rpb1_5ECOD (develop294)
EPHe7usyE1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PHECOD (develop294)
CPHe7usyC1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PHECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth J]PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Domain
G [auth J]PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain. Domain
A, B
PF07810TMC domain (TMC)TMC domainThese sequences are similar to a region conserved amongst various protein products of the transmembrane channel-like (TMC) gene family, such as Transmembrane channel-like protein 3 (Swiss:Q7TN63) and EVIN2 (Swiss:Q8IU68) - this region is termed the T ...These sequences are similar to a region conserved amongst various protein products of the transmembrane channel-like (TMC) gene family, such as Transmembrane channel-like protein 3 (Swiss:Q7TN63) and EVIN2 (Swiss:Q8IU68) - this region is termed the TMC domain [1]. Mutations in these genes are implicated in a number of human conditions, such as deafness and epidermodysplasia verruciformis [1]. TMC proteins are thought to have important cellular roles, and may be modifiers of ion channels or transporters [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth J]ARRestin Domain protein-
D, F
Transmembrane inner ear expressed protein- -
C, E
CALMyrin (Calcium and Integrin Binding protein) homolog -
A, B
Transmembrane channel-like protein 1

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, D, F
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage