7USE

Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCullin repeat-like8090821 3000059 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRas-like P-loop GTPases8057406 3002022 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRas-like P-loop GTPases8057406 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF05994,PF07159e7useA1 A: alpha complex topologyX: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 (From Topology)H: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 (From Topology)T: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1F: PF05994,PF07159ECOD (1.6)
BPF09735e7useB1 A: alpha complex topologyX: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 (From Topology)H: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 (From Topology)T: Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1F: PF09735ECOD (1.6)
EPF07815e7useE1 A: alpha bundlesX: Abl interactor 2 (From Topology)H: Abl interactor 2 (From Topology)T: Abl interactor 2F: PF07815ECOD (1.6)
FPF00071e7useF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00071ECOD (1.6)
GPF00071e7useG1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00071ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF05994Cytoplasmic Fragile-X interacting family (FragX_IP)Cytoplasmic Fragile-X interacting family- Family
PF07159CYRIA/CYRIB Rac1 binding domain (CYRIA-B_Rac1-bd)CYRIA/CYRIB Rac1 binding domainThis domain has been annotated as Rac1-binding domain [1, 2]. It can be found in human CYRIA/CYRIB and at the N terminus of CYFIP1/2 [3]. CYFIP proteins are known RAC1 effectors that stimulate actin polymerization [3]. In mice, CYRIB (also known as C ...This domain has been annotated as Rac1-binding domain [1, 2]. It can be found in human CYRIA/CYRIB and at the N terminus of CYFIP1/2 [3]. CYFIP proteins are known RAC1 effectors that stimulate actin polymerization [3]. In mice, CYRIB (also known as CYRI or FAM49B) negatively regulates RAC1-driven cytoskeletal remodelling and plays a role in restricting infection mediated by Mycobacterium tuberculosis and Listeria monocytogenes [3].
Domain
PF09735Nck-associated protein 1 (Nckap1)Nck-associated protein 1- Family
PF07815Abl-interactor HHR (Abi_HHR)Abl-interactor HHR- Family
PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain
PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cytoplasmic FMR1-interacting protein 1
Nck-associated protein 1-
Wiskott-Aldrich syndrome protein family member 1
Protein BRICK1
Abl interactor 2
Ras-related C3 botulinum toxin substrate 1
Ras-related C3 botulinum toxin substrate 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR008081Cytoplasmic FMR1-interactingFamily
IPR009828CYRIA/CYRIB, Rac1 binding domainDomain
IPR019137Nck-associated protein 1Family
IPR003124WH2 domainDomain
IPR028288SCAR/WAVE familyFamily
IPR033378Protein BRICK1Family
IPR000727Target SNARE coiled-coil homology domainDomain
IPR036028SH3-like domain superfamilyHomologous Superfamily
IPR028457ABI familyFamily
IPR001452SH3 domainDomain
IPR035726Abl interactor 2, SH3 domainDomain
IPR012849Abl-interactor, homeo-domain homologous domainDomain
IPR003578Small GTPase RhoFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001806Small GTPaseFamily
IPR005225Small GTP-binding protein domainDomain
IPR003578Small GTPase RhoFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001806Small GTPaseFamily
IPR005225Small GTP-binding protein domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
Pharos:  Q7L576
Pharos:  Q9Y2A7
Pharos:  Q92558
Pharos:  Q8WUW1
Pharos:  Q9NYB9
Pharos:  P63000
Pharos:  P63000