7UR2 | pdb_00007ur2

Crystal structure of the Sec14 domain of the RhoGEF Kalirin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	CRAL_TRIO	e7ur2H1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
G	CRAL_TRIO	e7ur2G1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
F	CRAL_TRIO	e7ur2F1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
E	CRAL_TRIO	e7ur2E1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
D	CRAL_TRIO	e7ur2D1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
C	CRAL_TRIO	e7ur2C1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
B	CRAL_TRIO	e7ur2B1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)
A	CRAL_TRIO	e7ur2A1	A: a/b three-layered sandwiches	X: SpoIIaa-like (From Topology)	H: SpoIIaa-like (From Topology)	T: SpoIIaa-like	F: CRAL_TRIO	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF13716	Divergent CRAL/TRIO domain (CRAL_TRIO_2)	Divergent CRAL/TRIO domain	This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Isoform 7 of Kalirin	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding metal ion binding	multi-multicellular organism process multicellular organismal process maternal process involved in parturition reproductive process multicellular organismal reproductive process parturition multi-organism reproductive process adult locomotory behavior behavior adult behavior locomotory behavior maternal behavior parental behavior reproductive behavior multi-multicellular organism process multicellular organismal process maternal process involved in parturition reproductive process multicellular organismal reproductive process parturition multi-organism reproductive process adult locomotory behavior behavior adult behavior locomotory behavior maternal behavior parental behavior reproductive behavior cellular component organization cell junction organization neuromuscular junction development cellular process synapse organization cellular component organization or biogenesis system process learning learning or memory nervous system process nonassociative learning cognition habituation memory biological process involved in intraspecies interaction between organisms social behavior developmental process regulation of body fluid levels secretion transport mammary gland development gland development animal organ development biological regulation establishment of localization body fluid secretion localization anatomical structure development lactation regulation of biological quality regulation of localization regulation of hormone secretion regulation of cellular process nitrogen compound transport regulation of peptide secretion signaling negative regulation of signaling negative regulation of biological process negative regulation of transport hormone secretion negative regulation of cell communication cell communication negative regulation of peptide secretion peptide secretion regulation of secretion by cell secretion by cell negative regulation of secretion amide transport signal release negative regulation of hormone secretion negative regulation of cellular process negative regulation of secretion by cell regulation of peptide hormone secretion regulation of signaling regulation of biological process growth hormone secretion regulation of transport negative regulation of peptide hormone secretion regulation of hormone levels regulation of growth hormone secretion regulation of peptide transport export from cell cell-cell signaling negative regulation of growth hormone secretion regulation of secretion peptide transport peptide hormone secretion regulation of cell communication hormone transport positive regulation of dendritic spine morphogenesis positive regulation of nervous system development cell projection organization positive regulation of dendritic spine development regulation of cell differentiation regulation of neurogenesis neuron projection development regulation of cell morphogenesis regulation of cell development positive regulation of developmental process multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation regulation of dendrite morphogenesis regulation of synapse structure or activity positive regulation of cell projection organization dendritic spine morphogenesis system development dendritic spine development postsynapse organization dendritic spine organization regulation of cell projection organization positive regulation of cell development regulation of postsynapse organization nervous system development positive regulation of cell morphogenesis generation of neurons regulation of dendrite development positive regulation of multicellular organismal process regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process regulation of developmental process plasma membrane bounded cell projection morphogenesis positive regulation of biological process cell development regulation of dendritic spine development cell morphogenesis regulation of nervous system development neurogenesis dendrite development positive regulation of neuron projection development positive regulation of cell differentiation positive regulation of neurogenesis regulation of multicellular organismal process regulation of anatomical structure morphogenesis positive regulation of cellular process regulation of multicellular organismal development plasma membrane bounded cell projection organization dendrite morphogenesis positive regulation of dendrite morphogenesis cell morphogenesis involved in neuron differentiation anatomical structure morphogenesis regulation of synapse organization neuron development regulation of dendritic spine morphogenesis neuron projection organization regulation of plasma membrane bounded cell projection organization	cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle cytoskeleton organelle membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001251	CRAL-TRIO lipid binding domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001849	Pleckstrin homology domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003598	Immunoglobulin subtype 2	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036865	CRAL-TRIO lipid binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR028570	Kalirin/Triple functional domain protein, SH3 domain 1	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000219	Dbl homology domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR047054	Kalirin/Triple functional domain protein, pleckstrin homology (PH) domain 1	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000719	Protein kinase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011993	PH-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003599	Immunoglobulin domain subtype	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013098	Immunoglobulin I-set	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR051336	Rho GTPase-activating Guanine Nucleotide Exchange Factors	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR047053	Kalirin/Triple functional domain protein, SH3 domain 2	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003961	Fibronectin type III	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001452	SH3 domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR035899	Dbl homology (DH) domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR018159	Spectrin/alpha-actinin	Repeat
A, B, C, D, E A, B, C, D, E, F, G, H	IPR007110	Immunoglobulin-like domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR055251	SOS1/NGEF-like, PH domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR008271	Serine/threonine-protein kinase, active site	Active Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036116	Fibronectin type III superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR002017	Spectrin repeat	Repeat