7UQC

phospho-GlialCAM peptide AA370-389 with Fab MS39p2w174

External Resource: Annotation

Domain Annotation: ECOD Classification
SAbDab Antibody Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth G]	PF07654	e7uqcG1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
D [auth G]	PF07686	e7uqcG2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
F [auth I]	PF07654	e7uqcI1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
F [auth I]	PF07686	e7uqcI2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
H [auth D]	PF07654	e7uqcD1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
H [auth D]	PF07686	e7uqcD2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
A	PF07654	e7uqcA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
A	PF07686	e7uqcA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
B	PF07654	e7uqcB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
B	PF07686	e7uqcB2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
G [auth J]	PF07654	e7uqcJ1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
G [auth J]	PF07686	e7uqcJ2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
E [auth H]	PF07654	e7uqcH2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
E [auth H]	PF07686	e7uqcH1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)
I [auth E]	PF07654	e7uqcE2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07654	ECOD (1.6)
I [auth E]	PF07686	e7uqcE1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PF07686	ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
A, D [auth G], F [auth I], H [auth D]	Light Chain	IGKV2	Kappa	hepatocyte cell adhesion molecule	SAbDab (2024-05-10)
B, E [auth H], G [auth J], I [auth E]	Heavy Chain	IGHV3	-	hepatocyte cell adhesion molecule	SAbDab (2024-05-10)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, D [auth G], F [auth I], H [auth D]	Fab MS39p2w174 Light Chain	-	-	-
B, E [auth H], G [auth J], I [auth E]	Fab MS39p2w174 Heavy Chain	-	-	-
C, J [auth F]	Hepatocyte cell adhesion molecule	-	cellular process cell cycle protein localization localization cellular localization cellular macromolecule localization macromolecule localization cell adhesion regulation of biological process regulation of cellular process biological regulation regulation of cell cycle	membrane cellular anatomical entity cell-cell junction anchoring junction cell junction axon cell projection neuron projection plasma membrane bounded cell projection intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, J [auth F]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
C, J [auth F]	IPR003599	Immunoglobulin subtype	Domain
C, J [auth F]	IPR003598	Immunoglobulin subtype 2	Domain
C, J [auth F]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
C, J [auth F]	IPR013106	Immunoglobulin V-set domain	Domain
C, J [auth F]	IPR007110	Immunoglobulin-like domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C, J [auth F]	Pharos: Q14CZ8	megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability megalencephalic leukoencephalopathy with subcortical cysts 2A megalencephalic leukoencephalopathy with subcortical cysts macrocephaly-autism syndrome atypical teratoid rhabdoid tumor ductal breast carcinoma in situ intellectual disability leukodystrophy medulloblastoma psoriasis breast carcinoma Epileptic encephalopathy invasive ductal breast carcinoma breast fibroadenoma glioblastoma megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability megalencephalic leukoencephalopathy with subcortical cysts 2A megalencephalic leukoencephalopathy with subcortical cysts macrocephaly-autism syndrome atypical teratoid rhabdoid tumor ductal breast carcinoma in situ intellectual disability leukodystrophy medulloblastoma psoriasis breast carcinoma Epileptic encephalopathy invasive ductal breast carcinoma breast fibroadenoma glioblastoma large cell medulloblastoma malignant glioma megalencephalic leukoencephalopathy with subcortical cysts 1 primitive neuroectodermal tumor

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
C, J [auth F]	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.