7UNF | pdb_00007unf

CryoEM structure of a mEAK7 bound human V-ATPase complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Q [auth C]SCOP2B SuperfamilyVacuolar ATP synthase subunit C 8101529 3001744 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Q [auth C]Actine7unfC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
P [auth F]Actine7unfF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
M [auth e]Actine7unfe1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
N [auth f]Actine7unff1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
O [auth g]Actine7unfg1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
J [auth b]Actine7unfb1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
K [auth c]Actine7unfc1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
L [auth d]Actine7unfd1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
I [auth D]Actine7unfD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
F [auth O]Actine7unfO1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
G [auth P]Actine7unfP1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
H [auth Q]Actine7unfQ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
C [auth L]Actine7unfL1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
D [auth M]Actine7unfM1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
E [auth N]Actine7unfN1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
AA [auth 2]Actine7unf21 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
BA [auth 3]Actine7unf31 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
CA [auth 4]Actine7unf41 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
DA [auth 5]Actine7unf51 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
EA [auth 6]Actine7unf61 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
FA [auth 7]Actine7unf71 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
GA [auth 0]Actine7unf01 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
X [auth 8]Actine7unf81 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
Y [auth 9]Actine7unf91 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
S [auth k]Actine7unfk1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)
R [auth H]Actine7unfH1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: ActinECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
Q [auth C]PF03223V-ATPase subunit C (V-ATPase_C)V-ATPase subunit C- Family
Q [auth C]PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
P [auth F]PF01990ATP synthase (F/14-kDa) subunit (ATP-synt_F)ATP synthase (F/14-kDa) subunit- Family
P [auth F]PF03179Vacuolar (H+)-ATPase G subunit (V-ATPase_G)Vacuolar (H+)-ATPase G subunit- Coiled-coil
I [auth D]PF01813ATP synthase subunit D (ATP-synt_D)ATP synthase subunit D- Family
I [auth D]PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
F [auth O],
G [auth P],
H [auth Q]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
F [auth O],
G [auth P],
H [auth Q]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. Domain
F [auth O],
G [auth P],
H [auth Q]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain
C [auth L],
D [auth M],
E [auth N]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
C [auth L],
D [auth M],
E [auth N]
PF05493ATP synthase subunit H (ATP_synt_H)ATP synthase subunit H- Family
C [auth L],
D [auth M],
E [auth N]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. Domain
C [auth L],
D [auth M],
E [auth N]
PF16886ATPsynthase alpha/beta subunit barrel-sandwich domain (ATP-synt_ab_Xtn)ATPsynthase alpha/beta subunit barrel-sandwich domainThis barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel ...This barrel-sandwich domain is found in the alpha-beta catalytic subunit of VATA or V-type proton ATPase catalytic subunit at the N-terminal end. This domain has a circularly permuted topology compared to other barrel-sandwich domains. In VATA barrel-sandwich domain the C-terminal strand is circularly permuted and occupies the spatial position of the N-terminal strand in other hybrid domains.
Domain
C [auth L],
D [auth M],
E [auth N]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain
B [auth U]PF07534TLDc domain (TLD)TLDc domainThis domain is predicted to be an enzyme [1] and is often found associated with Pfam:PF01476. It's structure consists of a beta-sandwich surrounded by two helices and two one-turn helices [2]. Domain
Z [auth 1]PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
R [auth H]PF11698V-ATPase subunit H (V-ATPase_H_C)V-ATPase subunit H- Repeat
R [auth H]PF03224V-ATPase subunit H (V-ATPase_H_N)V-ATPase subunit H- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Q [auth C]V-type proton ATPase subunit C 1
P [auth F]V-type proton ATPase subunit F
M [auth e],
N [auth f],
O [auth g]
V-type proton ATPase subunit G 1
J [auth b],
K [auth c],
L [auth d]
V-type proton ATPase subunit E 1
I [auth D]V-type proton ATPase subunit D
F [auth O],
G [auth P],
H [auth Q]
V-type proton ATPase subunit B, brain isoform
C [auth L],
D [auth M],
E [auth N]
V-type proton ATPase catalytic subunit A
B [auth U]KIAA1609 protein, isoform CRA_a-
Z [auth 1]V-type proton ATPase 21 kDa proteolipid subunit
V-type proton ATPase 16 kDa proteolipid subunit
W [auth r]ATPase H(+)-transporting lysosomal accessory protein 2 -
V [auth s]V-type proton ATPase subunit S1
U [auth n]Ribonuclease kappa
T [auth m]V-type proton ATPase subunit e 1
S [auth k]V-type proton ATPase subunit d 1
R [auth H]V-type proton ATPase subunit H
A [auth a]V-type proton ATPase 116 kDa subunit a 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
Q [auth C]IPR036132Vacuolar ATP synthase subunit C superfamilyHomologous Superfamily
Q [auth C]IPR004907ATPase, V1 complex, subunit CFamily
P [auth F]IPR008218ATPase, V1 complex, subunit FFamily
P [auth F]IPR036906ATPase, V1 complex, subunit F superfamilyHomologous Superfamily
P [auth F]IPR005772ATPase, V1 complex, subunit F, eukaryoticFamily
M [auth e],
N [auth f],
O [auth g]
IPR005124Vacuolar (H+)-ATPase G subunitFamily
J [auth b],
K [auth c],
L [auth d]
IPR038495V-type ATPase subunit E, C-terminal domain superfamilyHomologous Superfamily
J [auth b],
K [auth c],
L [auth d]
IPR002842V-type ATPase subunit EFamily
I [auth D]IPR002699ATPase, V1 complex, subunit DFamily
F [auth O],
G [auth P],
H [auth Q]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
F [auth O],
G [auth P],
H [auth Q]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth O],
G [auth P],
H [auth Q]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
F [auth O],
G [auth P],
H [auth Q]
IPR005723ATPase, V1 complex, subunit BFamily
F [auth O],
G [auth P],
H [auth Q]
IPR022879V-type ATP synthase regulatory subunit B/betaFamily
F [auth O],
G [auth P],
H [auth Q]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
F [auth O],
G [auth P],
H [auth Q]
IPR055190ATP synthase A/B type, C-terminal domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR022878V-type ATP synthase catalytic alpha chainFamily
C [auth L],
D [auth M],
E [auth N]
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR031686ATPsynthase alpha/beta subunit, barrel-sandwich domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR005725ATPase, V1 complex, subunit AFamily
C [auth L],
D [auth M],
E [auth N]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
C [auth L],
D [auth M],
E [auth N]
IPR055190ATP synthase A/B type, C-terminal domainDomain
B [auth U]IPR006571TLDc domainDomain
Z [auth 1]IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
Z [auth 1]IPR002379V-ATPase proteolipid subunit C-like domainDomain
Z [auth 1]IPR000245V-ATPase proteolipid subunitFamily
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR000245V-ATPase proteolipid subunitFamily
W [auth r]IPR012493Renin receptor-likeFamily
W [auth r]IPR057318Renin receptor, N-terminal domainDomain
W [auth r]IPR056780Renin receptor-like, C-terminal transmembrane spanning segmentDomain
V [auth s]IPR046755V-type proton ATPase subunit S1, luminal domainDomain
V [auth s]IPR008388V0 complex accessory subunit Ac45Family
V [auth s]IPR046756V-type proton ATPase subunit S1/VOA1, transmembrane domainDomain
U [auth n]IPR056552Ribonucl_KappaUnknown
U [auth n]IPR026770Ribonuclease kappaFamily
T [auth m]IPR017385ATPase, V0 complex, subunit e1/e2, metazoaFamily
T [auth m]IPR008389ATPase, V0 complex, subunit e1/e2Family
S [auth k]IPR044911V-type ATP synthase C/D subunit, domain 3 superfamilyHomologous Superfamily
S [auth k]IPR036079V-type ATP synthase subunit C/D subunit superfamilyHomologous Superfamily
S [auth k]IPR035067V-type ATPase subunit C/DHomologous Superfamily
S [auth k]IPR002843ATPase, V0 complex, C/D subunitFamily
S [auth k]IPR016727ATPase, V0 complex, subunit DFamily
R [auth H]IPR004908ATPase, V1 complex, subunit HFamily
R [auth H]IPR016024Armadillo-type foldHomologous Superfamily
R [auth H]IPR011989Armadillo-like helicalHomologous Superfamily
R [auth H]IPR038497ATPase, V1 complex, subunit H, C-terminal domain superfamilyHomologous Superfamily
R [auth H]IPR011987ATPase, V1 complex, subunit H, C-terminalDomain
A [auth a]IPR026028ATPase, V0 complex, subunit 116kDa, eukaryoticFamily
A [auth a]IPR002490V-type ATPase, V0 complex, 116kDa subunit familyFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
Q [auth C]PharosP21283
P [auth F]PharosQ16864
M [auth e],
N [auth f],
O [auth g]
PharosO75348
J [auth b],
K [auth c],
L [auth d]
PharosP36543
I [auth D]PharosQ9Y5K8
F [auth O],
G [auth P],
H [auth Q]
PharosP21281
C [auth L],
D [auth M],
E [auth N]
PharosP38606
B [auth U]PharosQ6P9B6
Z [auth 1]PharosQ99437
V [auth s]PharosQ15904
T [auth m]PharosO15342
S [auth k]PharosP61421
R [auth H]PharosQ9UI12
A [auth a]PharosQ9HBG4