7UIG
Mediator-PIC Early (Mediator A)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J [auth q] | SCOP2B Superfamily | Mediator of RNA polymerase II transcription subunit 17 | 8091516 | 3002517 | SCOP2B (2022-06-29) |
K [auth r] | SCOP2B Superfamily | CYTH-like phosphatases | 8090011 | 3001426 | SCOP2B (2022-06-29) |
M [auth t] | SCOP2B Superfamily | CYTH-like phosphatases | 8091513 | 3001426 | SCOP2B (2022-06-29) |
O [auth v] | SCOP2B Superfamily | Mediator subcomplex-like | 8051778 | 3001613 | SCOP2B (2022-06-29) |
P [auth w] | SCOP2B Superfamily | Mediator of RNA polymerase II transcription subunit 31 | 8105980 | 3002846 | SCOP2B (2022-06-29) |
C [auth f] | SCOP2B Superfamily | Mediator of RNA polymerase II transcription subunit 6 | 8091511 | 3002516 | SCOP2B (2022-06-29) |
D [auth g] | SCOP2B Superfamily | Mediator subcomplex-like | 8034652 | 3001613 | SCOP2B (2022-06-29) |
H [auth k] | SCOP2B Superfamily | Mediator subcomplex-like | 8051777 | 3001613 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
K [auth r] | PF09637 | e7uigr1 | A: a+b complex topology | X: mRNA triphosphatase CET1-related (From Topology) | H: mRNA triphosphatase CET1-related (From Topology) | T: mRNA triphosphatase CET1-related | F: PF09637 | ECOD (1.6) |
M [auth t] | PF08612 | e7uigt1 | A: a+b complex topology | X: mRNA triphosphatase CET1-related (From Topology) | H: mRNA triphosphatase CET1-related (From Topology) | T: mRNA triphosphatase CET1-related | F: PF08612 | ECOD (1.6) |
N [auth u] | PF11221 | e7uigu1 | A: alpha duplicates or obligate multimers | X: Mediator hinge subcomplex-like (From Homology) | H: Mediator hinge subcomplex-like | T: RNA polymerase II holoenzyme component SRB7 (MED21) | F: PF11221 | ECOD (1.6) |
O [auth v] | PF06179 | e7uigv1 | A: a+b complex topology | X: Mediator of RNA polymerase II transcription subunit 22 (From Topology) | H: Mediator of RNA polymerase II transcription subunit 22 (From Topology) | T: Mediator of RNA polymerase II transcription subunit 22 | F: PF06179 | ECOD (1.6) |
P [auth w] | PF05669 | e7uigw1 | A: a+b complex topology | X: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology) | H: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology) | T: Mediator of RNA polymerase II transcription submodule Med7N/31 | F: PF05669 | ECOD (1.6) |
C [auth f] | PF04934 | e7uigf1 | A: extended segments | X: Mediator of RNA polymerase II transcription subunit 6 (From Topology) | H: Mediator of RNA polymerase II transcription subunit 6 (From Topology) | T: Mediator of RNA polymerase II transcription subunit 6 | F: PF04934 | ECOD (1.6) |
D [auth g] | PF05983 | e7uigg1 | A: alpha duplicates or obligate multimers | X: Mediator hinge subcomplex-like (From Homology) | H: Mediator hinge subcomplex-like | T: MED7 hinge region | F: PF05983 | ECOD (1.6) |
D [auth g] | PF05983 | e7uigg2 | A: a+b complex topology | X: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology) | H: Mediator of RNA polymerase II transcription submodule Med7N/31 (From Topology) | T: Mediator of RNA polymerase II transcription submodule Med7N/31 | F: PF05983 | ECOD (1.6) |
E [auth h] | PF10232 | e7uigh1 | A: a+b complex topology | X: Mediator of RNA polymerase II transcription subunit 8 (From Topology) | H: Mediator of RNA polymerase II transcription subunit 8 (From Topology) | T: Mediator of RNA polymerase II transcription subunit 8 | F: PF10232 | ECOD (1.6) |
H [auth k] | PF10280 | e7uigk1 | A: a+b complex topology | X: Mediator of RNA polymerase II transcription subunit 11 (From Topology) | H: Mediator of RNA polymerase II transcription subunit 11 (From Topology) | T: Mediator of RNA polymerase II transcription subunit 11 | F: PF10280 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth a] | PF10744 | Mediator of RNA polymerase II transcription subunit 1 (Med1) | Mediator of RNA polymerase II transcription subunit 1 | Mediator complexes are basic necessities for linking transcriptional regulators to RNA polymerase II. This domain, Med1, is conserved from plants to fungi to humans and forms part of the Med9 submodule of the Srb/Med complex. it is one of three subu ... | Domain |
J [auth q] | PF10156 | Subunit 17 of Mediator complex (Med17) | Subunit 17 of Mediator complex | - | Family |
K [auth r] | PF09637 | Med18 protein (Med18) | Med18 protein | Med18 is one subunit of Mediator, a head-module multiprotein complex, that stimulates basal RNA polymerase II (Pol II) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Me ... | Domain |
L [auth s] | PF08633 | Rox3 mediator complex subunit (Rox3) | Rox3 mediator complex subunit | - | Family |
M [auth t] | PF08612 | TATA-binding related factor (TRF) of subunit 20 of Mediator complex (Med20) | TATA-binding related factor (TRF) of subunit 20 of Mediator complex | - | Family |
N [auth u] | PF11221 | Subunit 21 of Mediator complex (Med21) | Subunit 21 of Mediator complex | - | Family |
O [auth v] | PF06179 | Surfeit locus protein 5 subunit 22 of Mediator complex (Med22) | Surfeit locus protein 5 subunit 22 of Mediator complex | - | Family |
P [auth w] | PF05669 | SOH1 (Med31) | SOH1 | - | Family |
Q [auth z] | PF05001 | RNA polymerase Rpb1 C-terminal repeat (RNA_pol_Rpb1_R) | RNA polymerase Rpb1 C-terminal repeat | - | Repeat |
B [auth d] | PF10018 | Vitamin-D-receptor interacting Mediator subunit 4 (Med4) | Vitamin-D-receptor interacting Mediator subunit 4 | - | Family |
C [auth f] | PF04934 | MED6 mediator sub complex component (Med6) | MED6 mediator sub complex component | - | Family |
D [auth g] | PF05983 | MED7 protein (Med7) | MED7 protein | - | Family |
E [auth h] | PF10232 | Mediator of RNA polymerase II transcription complex subunit 8 (Med8) | Mediator of RNA polymerase II transcription complex subunit 8 | - | Family |
F [auth i] | PF07544 | RNA polymerase II transcription mediator complex subunit 9 (Med9) | RNA polymerase II transcription mediator complex subunit 9 | - | Family |
G [auth j] | PF09748 | Transcription factor subunit Med10 of Mediator complex (Med10) | Transcription factor subunit Med10 of Mediator complex | - | Family |
H [auth k] | PF10280 | Mediator complex protein (Med11) | Mediator complex protein | - | Family |
I [auth n] | PF08638 | Mediator complex subunit MED14 (Med14) | Mediator complex subunit MED14 | - | Family |