7TQS
Coxsackievirus A21 capsid subdomain in complex with mouse polyclonal antibody pAbC-3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
I [auth g] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068006 | 3000918 | SCOP2B (2022-06-29) |
M [auth k] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068006 | 3000918 | SCOP2B (2022-06-29) |
Q [auth o] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068006 | 3000918 | SCOP2B (2022-06-29) |
U [auth s] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068006 | 3000918 | SCOP2B (2022-06-29) |
E [auth c] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068006 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
I [auth g] | PF00073 | e7tqsg1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
M [auth k] | PF00073 | e7tqsk1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
Q [auth o] | PF00073 | e7tqso1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
U [auth s] | PF00073 | e7tqss1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
E [auth c] | PF00073 | e7tqsc1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
C [auth a] | PF00073 | e7tqsa1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
G [auth e] | PF00073 | e7tqse1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
K [auth i] | PF00073 | e7tqsi1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
O [auth m] | PF00073 | e7tqsm1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
S [auth q] | PF00073 | e7tqsq1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
D [auth b] | PF00073 | e7tqsb1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
H [auth f] | PF00073 | e7tqsf1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
L [auth j] | PF00073 | e7tqsj1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
P [auth n] | PF00073 | e7tqsn1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
T [auth r] | PF00073 | e7tqsr1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00073 | ECOD (1.6) |
J [auth h] | PF02226 | e7tqsh1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF02226 | ECOD (1.6) |
N [auth l] | PF02226 | e7tqsl1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF02226 | ECOD (1.6) |
R [auth p] | PF02226 | e7tqsp1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF02226 | ECOD (1.6) |
V [auth t] | PF02226 | e7tqst1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF02226 | ECOD (1.6) |
F [auth d] | PF02226 | e7tqsd1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF02226 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth c], I [auth g], M [auth k], Q [auth o], U [auth s] | PF00073 | picornavirus capsid protein (Rhv) | picornavirus capsid protein | CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ... | Domain |
C [auth a], G [auth e], K [auth i], O [auth m], S [auth q] | PF00073 | picornavirus capsid protein (Rhv) | picornavirus capsid protein | CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ... | Domain |
D [auth b], H [auth f], L [auth j], P [auth n], T [auth r] | PF00073 | picornavirus capsid protein (Rhv) | picornavirus capsid protein | CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ... | Domain |
F [auth d], J [auth h], N [auth l], R [auth p], V [auth t] | PF02226 | Picornavirus coat protein (VP4) (Pico_P1A) | Picornavirus coat protein (VP4) | - | Family |