Annotations: 7TQD

Structure of Enterobacter cloacae Cap2-CdnD02 2:1 complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	MATH_2	e7tqdC1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: MATH_2	ECOD (v295)
B	Uteroglobin	e7tqdB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Uteroglobin	ECOD (v295)
A	RuvB_C	e7tqdA1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: RuvB_C	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	Cyclic AMP-AMP-GMP synthase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups guanyl nucleotide binding GTP binding guanyl ribonucleotide binding cation binding metal ion binding	nucleoside phosphate metabolic process nucleobase-containing compound metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process metabolic process cellular process small molecule metabolic process primary metabolic process nucleotide metabolic process phosphorus metabolic process biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response nucleoside phosphate metabolic process nucleobase-containing compound metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process metabolic process cellular process small molecule metabolic process primary metabolic process nucleotide metabolic process phosphorus metabolic process biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-
A, B	Cap2	catalytic activity, acting on RNA hydro-lyase activity catalytic activity, acting on a nucleic acid tRNA threonylcarbamoyladenosine dehydratase activity catalytic activity, acting on a tRNA lyase activity catalytic activity carbon-oxygen lyase activity ubiquitin-like modifier activating enzyme activity ligase activity, forming carbon-sulfur bonds catalytic activity, acting on a protein ligase activity ATP-dependent activity binding catalytic activity, acting on RNA hydro-lyase activity catalytic activity, acting on a nucleic acid tRNA threonylcarbamoyladenosine dehydratase activity catalytic activity, acting on a tRNA lyase activity catalytic activity carbon-oxygen lyase activity ubiquitin-like modifier activating enzyme activity ligase activity, forming carbon-sulfur bonds catalytic activity, acting on a protein ligase activity ATP-dependent activity binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding transferase activity	tRNA modification RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA modification biosynthetic process tRNA processing macromolecule modification tRNA modification RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process tRNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process RNA modification biosynthetic process tRNA processing macromolecule modification cyclic threonylcarbamoyladenosine biosynthetic process metabolic process cellular process macromolecule metabolic process RNA processing biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR043519	Nucleotidyltransferase superfamily	Homologous Superfamily
A, B	IPR000594	THIF-type NAD/FAD binding fold	Domain
A, B	IPR058964	Cap2, central linker domain	Domain
A, B	IPR045886	ThiF/MoeB/HesA family	Family
A, B	IPR035985	Ubiquitin-activating enzyme-like	Homologous Superfamily
A, B	IPR000594	THIF-type NAD/FAD binding fold	Domain
A, B	IPR058964	Cap2, central linker domain	Domain
A, B	IPR045886	ThiF/MoeB/HesA family	Family
A, B	IPR035985	Ubiquitin-activating enzyme-like	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7TQD | pdb_00007tqd

Structure of Enterobacter cloacae Cap2-CdnD02 2:1 complex

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage