7TPG | pdb_00007tpg

Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its ligand bound state


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]adh_short_C2e7tpgL1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: adh_short_C2ECOD (v294.2)
B [auth H]adh_short_C2e7tpgH1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: adh_short_C2ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L]Light ChainIGKV1 Kappaputative cell surface polysaccharide polymerase/ligaseSAbDab (2026-05-08)
B [auth H]Heavy ChainIGHV3 -putative cell surface polysaccharide polymerase/ligaseSAbDab (2026-05-08)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF04932O-Antigen ligase (Wzy_C)O-Antigen ligase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth L]Fab Light (L) Chain---
B [auth H]Fab Heavy (H) Chain---
A [auth B]Putative cell surface polysaccharide polymerase/ligase- -