7TOQ | pdb_00007toq

Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
AC [auth AS30]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
ZB [auth AS29]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
YB [auth AS28]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
WB [auth AS26]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053150 3000068 SCOP2B (2022-06-29)
VB [auth AS25]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
SB [auth AS22]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
RB [auth AS21]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053140 3000068 SCOP2B (2022-06-29)
QB [auth AS20]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
OB [auth AS18]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
KB [auth AS14]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
JB [auth AS13]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
JB [auth AS13]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
IB [auth AS12]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
HB [auth AS11]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
HB [auth AS11]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
F [auth AL03]SCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
EB [auth AS08]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
BB [auth AS05]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
XA [auth AS01]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
WA [auth AS00]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8097826 3001397 SCOP2B (2022-06-29)
TA [auth AL43]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
MA [auth AL36]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
KA [auth AL34]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
JA [auth AL33]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
IA [auth AL32]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
EA [auth AL28]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
DA [auth AL27]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
CA [auth AL26]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
Z [auth AL23]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
V [auth AL19]SCOP2 FamilyRibosomal protein L19 (L19e) 8107567 4001138 SCOP2 (2022-06-29)
V [auth AL19]SCOP2 SuperfamilyRibosomal protein L19 (L19e) 8107568 3000890 SCOP2 (2022-06-29)
R [auth AL15]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
N [auth AL11]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
M [auth AL10]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth AL06]Ribosomal_L6ee7toqAL061 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
CC [auth EL28]Ribosomal_L28ee7toqEL281 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
BC [auth AS31]Ribosomal_S27e7toqAS311 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
H [auth AL05]Ribosomal_L5ee7toqAL051 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
AC [auth AS30]Ribosomal_S30e7toqAS301 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
ZB [auth AS29]Ribosomal_S14_2e7toqAS291 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
YB [auth AS28]Ribosomal_S28ee7toqAS281 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
XB [auth AS27]Ribosomal_S27ee7toqAS271 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
WB [auth AS26]Ribosomal_S26ee7toqAS261 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
VB [auth AS25]Ribosomal_S25e7toqAS251 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
UB [auth AS24]Ribosomal_S24ee7toqAS241 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
TB [auth AS23]Ribosom_S12_S23e7toqAS231 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
SB [auth AS22]Ribosomal_S8_N_1e7toqAS222 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
SB [auth AS22]Ribosomal_S8_C_1e7toqAS221 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
RB [auth AS21]Ribosomal_S21ee7toqAS211 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
G [auth AL04]Ribosomal_L4e7toqAL041 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
G [auth AL04]Ribos_L4_asso_Ce7toqAL042 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
QB [auth AS20]Ribosomal_S10_1e7toqAS201 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
PB [auth AS19]Ribosomal_S19ee7toqAS191 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
OB [auth AS18]Ribosomal_S13e7toqAS181 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
NB [auth AS17]Ribosomal_S17ee7toqAS171 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
MB [auth AS16]Ribosomal_S9e7toqAS161 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
LB [auth AS15]Ribosomal_S19e7toqAS151 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
KB [auth AS14]Ribosomal_S11e7toqAS141 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
JB [auth AS13]Ribosomal_S13_Ne7toqAS131 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
JB [auth AS13]Ribosomal_S15_2e7toqAS132 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
IB [auth AS12]Ribosomal_L7Aee7toqAS121 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
HB [auth AS11]Ribosomal_S17_1e7toqAS111 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
F [auth AL03]Ribosomal_L3e7toqAL031 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
GB [auth AS10]S10_plectine7toqAS101 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
FB [auth AS09]S4e7toqAS091 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
EB [auth AS08]Ribosomal_S8ee7toqAS081 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
DB [auth AS07]Ribosomal_S7e_Ne7toqAS071 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
DB [auth AS07]Ribosomal_S7e_C_1e7toqAS072 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
CB [auth AS06]Ribosomal_S6ee7toqAS061 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
BB [auth AS05]Ribosomal_S7_1e7toqAS051 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
AB [auth AS04]Ribosomal_S4ee7toqAS041 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
AB [auth AS04]40S_S4_Ce7toqAS042 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
AB [auth AS04]RS4NTe7toqAS043 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
ZA [auth AS03]Ribosomal_S3_Ce7toqAS032 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
ZA [auth AS03]KH_2_3e7toqAS031 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
YA [auth AS02]Ribosomal_S5_C_1e7toqAS021 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
YA [auth AS02]Ribosomal_S5_3e7toqAS023 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
YA [auth AS02]Ribosomal_S5_2e7toqAS022 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
XA [auth AS01]Ribosomal_S3Ae_Ne7toqAS012 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
XA [auth AS01]Ribosomal_S3Ae_Ce7toqAS011 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
E [auth AL02]Ribosomal_L2_1e7toqAL022 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
E [auth AL02]Ribosomal_L2_C_2e7toqAL021 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
WA [auth AS00]Ribosomal_S2_2e7toqAS001 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
VA [auth ARAC]DUF1899e7toqARAC1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
TA [auth AL43]Ribosomal_L37aee7toqAL431 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth AL42]Ribosomal_L44e7toqAL421 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth AL41]Ribosomal_L41e7toqAL411 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QA [auth AL40]Ribosomal_L40ee7toqAL401 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PA [auth AL39]Ribosomal_L39e7toqAL391 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
OA [auth AL38]Ribosomal_L38ee7toqAL381 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
NA [auth AL37]Ribosomal_L37ee7toqAL371 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth AL36]Ribosomal_L36ee7toqAL361 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth AL35]Ribosomal_L29_2e7toqAL351 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
KA [auth AL34]Ribosomal_L34ee7toqAL341 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
JA [auth AL33]Ribosomal_L35Aee7toqAL331 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
IA [auth AL32]Ribosomal_L32ee7toqAL321 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
HA [auth AL31]Ribosomal_L31ee7toqAL311 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GA [auth AL30]Ribosomal_L7Aee7toqAL301 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth AL29]Ribosomal_L29ee7toqAL291 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
EA [auth AL28]Ribosomal_L18e7toqAL281 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth AL27]Ribosomal_L27ee7toqAL271 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth AL26]Ribosomal_L26e7toqAL261 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth AL25]Ribosomal_L23_3e7toqAL251 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
AA [auth AL24]Ribosomal_L24ee7toqAL241 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
Z [auth AL23]Ribosomal_L14e7toqAL231 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth AL22]Ribosomal_L22ee7toqAL221 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
X [auth AL21]Ribosomal_L21ee7toqAL211 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth AL20]Ribosomal_L18Ae7toqAL202 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
V [auth AL19]Ribosomal_L19e_Ne7toqAL191 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
V [auth AL19]Ribosomal_L19e_Ce7toqAL192 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
U [auth AL18]Ribosomal_L18e7toqAL181 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth AL17]Ribosomal_L22e7toqAL171 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth AL16]Ribosomal_L13e7toqAL161 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth AL15]Ribosomal_L15ee7toqAL151 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
Q [auth AL14]Ribosomal_L14ee7toqAL141 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth AL13]Ribosomal_L13ee7toqAL131 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth AL12]Ribosomal_L11e7toqAL121 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
N [auth AL11]Ribosomal_L5_Ce7toqAL111 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
M [auth AL10]Ribosomal_L16e7toqAL101 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
L [auth AL09]Ribosomal_L6_2e7toqAL091 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
L [auth AL09]Ribosomal_L6e7toqAL092 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
K [auth AL08]Ribosomal_L7Ae_1e7toqAL081 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
J [auth AL07]Ribosomal_L30_1e7toqAL071 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AL06]PF03868Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N)Ribosomal protein L6, N-terminal domainDomain
I [auth AL06]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
CC [auth EL28]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
BC [auth AS31]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
BC [auth AS31]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
AC [auth AS30]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
ZB [auth AS29]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
YB [auth AS28]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
XB [auth AS27]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
WB [auth AS26]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
VB [auth AS25]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
UB [auth AS24]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
TB [auth AS23]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
SB [auth AS22]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
RB [auth AS21]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
G [auth AL04]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
G [auth AL04]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
QB [auth AS20]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
OB [auth AS18]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
NB [auth AS17]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
LB [auth AS15]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
KB [auth AS14]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JB [auth AS13]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
JB [auth AS13]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
IB [auth AS12]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
HB [auth AS11]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
HB [auth AS11]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
F [auth AL03]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
GB [auth AS10]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
FB [auth AS09]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
FB [auth AS09]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
EB [auth AS08]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
CB [auth AS06]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
BB [auth AS05]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
AB [auth AS04]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
AB [auth AS04]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
AB [auth AS04]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
AB [auth AS04]PF00467KOW motif (KOW)KOW motif- Family
ZA [auth AS03]PF07650KH domain (KH_2)KH domainDomain
ZA [auth AS03]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
XA [auth AS01]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
WA [auth AS00]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
VA [auth ARAC]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
TA [auth AL43]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
SA [auth AL42]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
NA [auth AL37]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MA [auth AL36]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LA [auth AL35]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
KA [auth AL34]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
JA [auth AL33]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
IA [auth AL32]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
HA [auth AL31]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
EA [auth AL28]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
DA [auth AL27]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
DA [auth AL27]PF00467KOW motif (KOW)KOW motif- Family
CA [auth AL26]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
CA [auth AL26]PF00467KOW motif (KOW)KOW motif- Family
AA [auth AL24]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
Z [auth AL23]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
X [auth AL21]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
V [auth AL19]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
T [auth AL17]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
R [auth AL15]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth AL14]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth AL13]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
N [auth AL11]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
N [auth AL11]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
M [auth AL10]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
L [auth AL09]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AL06]60S ribosomal protein L6
FC [auth PTRN]tRNAfMet---
EC [auth PR]PR20, ALS/FTD dipeptide repeat protein---
DC [auth MRNA]RNA (5'-R(*CP*AP*CP*AP*UP*GP*UP*UP*CP*C)-3')---
CC [auth EL28]60S ribosomal protein L28
BC [auth AS31]40S ribosomal protein S27a
H [auth AL05]60S ribosomal protein L5
AC [auth AS30]40S ribosomal protein S30
ZB [auth AS29]40S ribosomal protein S29
YB [auth AS28]40S ribosomal protein S28
XB [auth AS27]40S ribosomal protein S27
WB [auth AS26]eS26
VB [auth AS25]40S ribosomal protein S25
UB [auth AS24]40S ribosomal protein S24
TB [auth AS23]40S ribosomal protein S23
SB [auth AS22]40S ribosomal protein S15a
RB [auth AS21]eS21
G [auth AL04]60S ribosomal protein L4
QB [auth AS20]40S ribosomal protein S20
PB [auth AS19]eS19---
OB [auth AS18]40S ribosomal protein S18
NB [auth AS17]40S ribosomal protein S17
MB [auth AS16]uS9---
LB [auth AS15]40S ribosomal protein S15
KB [auth AS14]40S ribosomal protein S14
JB [auth AS13]40S ribosomal protein S13
IB [auth AS12]40S ribosomal protein S12
HB [auth AS11]40S ribosomal protein S11
F [auth AL03]60S ribosomal protein L3
GB [auth AS10]40S ribosomal protein S10 -
FB [auth AS09]40S ribosomal protein S9
EB [auth AS08]40S ribosomal protein S8
DB [auth AS07]eS7---
CB [auth AS06]40S ribosomal protein S6
BB [auth AS05]Ribosomal protein S5
AB [auth AS04]40S ribosomal protein S4
ZA [auth AS03]40S ribosomal protein S3
YA [auth AS02]40S ribosomal protein S2---
XA [auth AS01]40S ribosomal protein S3a
E [auth AL02]uL2---
WA [auth AS00]40S_SA_C domain-containing protein
VA [auth ARAC]Receptor of activated protein C kinase 1
UA [auth ALP0]60S acidic ribosomal protein P0---
TA [auth AL43]60S ribosomal protein L37a
SA [auth AL42]eL42
RA [auth AL41]eL41---
QA [auth AL40]eL40---
PA [auth AL39]eL39---
OA [auth AL38]eL38---
NA [auth AL37]60S ribosomal protein L37
D [auth A5S]5S rRNA---
MA [auth AL36]60S ribosomal protein L36
LA [auth AL35]60S ribosomal protein L35
KA [auth AL34]60S ribosomal protein L34
JA [auth AL33]60S ribosomal protein L35a
IA [auth AL32]60S ribosomal protein L32
HA [auth AL31]60S ribosomal protein L31
GA [auth AL30]eL30---
FA [auth AL29]eL29---
EA [auth AL28]60S ribosomal protein L27a
DA [auth AL27]60S ribosomal protein L27
C [auth A58S]5.8S rRNA---
CA [auth AL26]60S ribosomal protein L26
BA [auth AL25]uL23---
AA [auth AL24]Ribosomal protein L24
Z [auth AL23]60S ribosomal protein L23
Y [auth AL22]eL22---
X [auth AL21]60S ribosomal protein L21
W [auth AL20]eL20---
V [auth AL19]60S ribosomal protein L19
U [auth AL18]eL18---
T [auth AL17]60S ribosomal protein L17
B [auth A25S]28S rRNA---
S [auth AL16]uL13---
R [auth AL15]60S ribosomal protein L15
Q [auth AL14]60S ribosomal protein L14
P [auth AL13]eL13
O [auth AL12]60S ribosomal protein L12
N [auth AL11]60S ribosomal protein L11
M [auth AL10]Ribosomal protein L10
L [auth AL09]60S ribosomal protein L9
K [auth AL08]eL8---
J [auth AL07]uL30---
A [auth A18S]18S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AL06]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
I [auth AL06]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
I [auth AL06]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth AL06]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
I [auth AL06]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth AL06]IPR000915Large ribosomal subunit protein eL6Family
CC [auth EL28]IPR029004Ribosomal eL28/Mak16Domain
CC [auth EL28]IPR002672Large ribosomal subunit protein eL28Family
BC [auth AS31]IPR019954Ubiquitin conserved siteConserved Site
BC [auth AS31]IPR000626Ubiquitin-like domainDomain
BC [auth AS31]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
BC [auth AS31]IPR002906Small ribosomal subunit protein eS31Domain
BC [auth AS31]IPR019956Ubiquitin domainDomain
BC [auth AS31]IPR050158Ubiquitin and ubiquitin-likeFamily
BC [auth AS31]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BC [auth AS31]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
H [auth AL05]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
H [auth AL05]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
AC [auth AS30]IPR039415Ubiquitin-like protein FUBIDomain
AC [auth AS30]IPR019956Ubiquitin domainDomain
AC [auth AS30]IPR019954Ubiquitin conserved siteConserved Site
AC [auth AS30]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
AC [auth AS30]IPR000626Ubiquitin-like domainDomain
AC [auth AS30]IPR006846Small ribosomal subunit protein eS30Family
ZB [auth AS29]IPR001209Small ribosomal subunit protein uS14Family
ZB [auth AS29]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
ZB [auth AS29]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
ZB [auth AS29]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
YB [auth AS28]IPR028626Ribosomal protein eS28 conserved siteConserved Site
YB [auth AS28]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
YB [auth AS28]IPR000289Small ribosomal subunit protein eS28Family
XB [auth AS27]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
XB [auth AS27]IPR000592Small ribosomal subunit protein eS27Family
XB [auth AS27]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WB [auth AS26]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
WB [auth AS26]IPR000892Small ribosomal subunit protein eS26Family
WB [auth AS26]IPR047864Ribosomal protein eS26, conserved siteConserved Site
VB [auth AS25]IPR004977Small ribosomal subunit protein eS25Family
VB [auth AS25]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
UB [auth AS24]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
UB [auth AS24]IPR001976Small ribosomal subunit protein eS24Family
UB [auth AS24]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
UB [auth AS24]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
TB [auth AS23]IPR006032Small ribosomal subunit protein uS12Family
TB [auth AS23]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TB [auth AS23]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
SB [auth AS22]IPR000630Small ribosomal subunit protein uS8Family
SB [auth AS22]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
SB [auth AS22]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RB [auth AS21]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
RB [auth AS21]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
RB [auth AS21]IPR001931Small ribosomal subunit protein eS21Family
G [auth AL04]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
G [auth AL04]IPR002136Large ribosomal subunit protein uL4Family
G [auth AL04]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
G [auth AL04]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
G [auth AL04]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
QB [auth AS20]IPR001848Small ribosomal subunit protein uS10Family
QB [auth AS20]IPR027486Small ribosomal subunit protein uS10 domainDomain
QB [auth AS20]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
QB [auth AS20]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
QB [auth AS20]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
OB [auth AS18]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OB [auth AS18]IPR001892Small ribosomal subunit protein uS13Family
OB [auth AS18]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OB [auth AS18]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
NB [auth AS17]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
NB [auth AS17]IPR001210Small ribosomal subunit protein eS17Family
NB [auth AS17]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
LB [auth AS15]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
LB [auth AS15]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
LB [auth AS15]IPR002222Small ribosomal subunit protein uS19Family
LB [auth AS15]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
KB [auth AS14]IPR001971Small ribosomal subunit protein uS11Family
KB [auth AS14]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KB [auth AS14]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JB [auth AS13]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
JB [auth AS13]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
JB [auth AS13]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
JB [auth AS13]IPR000589Small ribosomal subunit protein uS15Family
IB [auth AS12]IPR000530Small ribosomal subunit protein eS12Family
IB [auth AS12]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IB [auth AS12]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
IB [auth AS12]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
HB [auth AS11]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
HB [auth AS11]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
HB [auth AS11]IPR000266Small ribosomal subunit protein uS17Family
HB [auth AS11]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
HB [auth AS11]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
F [auth AL03]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth AL03]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth AL03]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
F [auth AL03]IPR000597Large ribosomal subunit protein uL3Family
F [auth AL03]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
GB [auth AS10]IPR037447Small ribosomal subunit protein eS10Family
GB [auth AS10]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
GB [auth AS10]IPR005326Plectin/eS10, N-terminalDomain
FB [auth AS09]IPR002942RNA-binding S4 domainDomain
FB [auth AS09]IPR022801Small ribosomal subunit protein uS4Family
FB [auth AS09]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
FB [auth AS09]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
FB [auth AS09]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
FB [auth AS09]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EB [auth AS08]IPR001047Small ribosomal subunit protein eS8Family
EB [auth AS08]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
EB [auth AS08]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
EB [auth AS08]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
CB [auth AS06]IPR014401Small ribosomal subunit protein eS6-likeFamily
CB [auth AS06]IPR001377Small ribosomal subunit protein eS6Family
CB [auth AS06]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
BB [auth AS05]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
BB [auth AS05]IPR000235Small ribosomal subunit protein uS7Family
BB [auth AS05]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
BB [auth AS05]IPR023798Small ribosomal subunit protein uS7 domainDomain
BB [auth AS05]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
AB [auth AS04]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
AB [auth AS04]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
AB [auth AS04]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
AB [auth AS04]IPR002942RNA-binding S4 domainDomain
AB [auth AS04]IPR013845Small ribosomal subunit protein eS4, central regionDomain
AB [auth AS04]IPR000876Small ribosomal subunit protein eS4Family
AB [auth AS04]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AB [auth AS04]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
AB [auth AS04]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
AB [auth AS04]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
AB [auth AS04]IPR005824KOWDomain
ZA [auth AS03]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
ZA [auth AS03]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
ZA [auth AS03]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
ZA [auth AS03]IPR004044K Homology domain, type 2Domain
ZA [auth AS03]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
ZA [auth AS03]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
ZA [auth AS03]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
XA [auth AS01]IPR001593Small ribosomal subunit protein eS1Family
XA [auth AS01]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
XA [auth AS01]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
WA [auth AS00]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
WA [auth AS00]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
WA [auth AS00]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
WA [auth AS00]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
WA [auth AS00]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
WA [auth AS00]IPR001865Small ribosomal subunit protein uS2Family
WA [auth AS00]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
VA [auth ARAC]IPR019775WD40 repeat, conserved siteConserved Site
VA [auth ARAC]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
VA [auth ARAC]IPR045223Small ribosomal subunit protein RACK1-likeFamily
VA [auth ARAC]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
VA [auth ARAC]IPR001680WD40 repeatRepeat
VA [auth ARAC]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
TA [auth AL43]IPR002674Large ribosomal subunit protein eL43Family
TA [auth AL43]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TA [auth AL43]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth AL42]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
SA [auth AL42]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth AL42]IPR000552Large ribosomal subunit protein eL42Family
NA [auth AL37]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
NA [auth AL37]IPR001569Large ribosomal subunit protein eL37Family
NA [auth AL37]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
NA [auth AL37]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth AL36]IPR000509Large ribosomal subunit protein eL36Family
MA [auth AL36]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth AL35]IPR001854Large ribosomal subunit protein uL29Family
LA [auth AL35]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
LA [auth AL35]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
LA [auth AL35]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
KA [auth AL34]IPR008195Large ribosomal subunit protein eL34Family
KA [auth AL34]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
KA [auth AL34]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
JA [auth AL33]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
JA [auth AL33]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
JA [auth AL33]IPR001780Large ribosomal subunit protein eL33Family
JA [auth AL33]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
IA [auth AL32]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
IA [auth AL32]IPR001515Large ribosomal subunit protein eL32Family
IA [auth AL32]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
HA [auth AL31]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
HA [auth AL31]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
HA [auth AL31]IPR000054Large ribosomal subunit protein eL31Family
EA [auth AL28]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
EA [auth AL28]IPR021131Large ribosomal subunit protein uL15/eL18Domain
EA [auth AL28]IPR030878Large ribosomal subunit protein uL15Family
EA [auth AL28]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
EA [auth AL28]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth AL27]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
DA [auth AL27]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
DA [auth AL27]IPR005824KOWDomain
DA [auth AL27]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
DA [auth AL27]IPR001141Large ribosomal subunit protein eL27Family
DA [auth AL27]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth AL26]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
CA [auth AL26]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
CA [auth AL26]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth AL26]IPR005824KOWDomain
CA [auth AL26]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth AL26]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
AA [auth AL24]IPR011017TRASH domainDomain
AA [auth AL24]IPR056366Large ribosomal subunit protein eL24Family
AA [auth AL24]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
AA [auth AL24]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
AA [auth AL24]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
Z [auth AL23]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Z [auth AL23]IPR000218Large ribosomal subunit protein uL14Family
Z [auth AL23]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth AL21]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
X [auth AL21]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
X [auth AL21]IPR001147Large ribosomal subunit protein eL21Family
X [auth AL21]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth AL19]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
V [auth AL19]IPR039547Large ribosomal subunit protein eL19Family
V [auth AL19]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
V [auth AL19]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
V [auth AL19]IPR000196Large ribosomal subunit protein eL19 domainDomain
V [auth AL19]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
T [auth AL17]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T [auth AL17]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
T [auth AL17]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth AL17]IPR001063Large ribosomal subunit protein uL22Family
R [auth AL15]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
R [auth AL15]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
R [auth AL15]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
R [auth AL15]IPR000439Large ribosomal subunit protein eL15Family
Q [auth AL14]IPR039660Large ribosomal subunit protein eL14Family
Q [auth AL14]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Q [auth AL14]IPR002784Large ribosomal subunit protein eL14 domainDomain
Q [auth AL14]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth AL13]IPR001380Large ribosomal subunit protein eL13Family
O [auth AL12]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
O [auth AL12]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
O [auth AL12]IPR000911Ribosomal protein uL11Family
O [auth AL12]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
O [auth AL12]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
O [auth AL12]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
N [auth AL11]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
N [auth AL11]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
N [auth AL11]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
N [auth AL11]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
N [auth AL11]IPR002132Large ribosomal subunit protein uL5Family
M [auth AL10]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
M [auth AL10]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth AL10]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
M [auth AL10]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth AL10]IPR047873Large ribosomal subunit protein uL16Family
L [auth AL09]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
L [auth AL09]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
L [auth AL09]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
L [auth AL09]IPR000702Large ribosomal subunit protein uL6-likeFamily