7TAX | pdb_00007tax

Cryo-EM structure of the Csy-AcrIF24-promoter DNA complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyCRISPR-associated proteins 8052171 3001554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AB12-bindinge7taxA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
BB12-bindinge7taxB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
DB12-bindinge7taxD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
EB12-bindinge7taxE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
FB12-bindinge7taxF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
GB12-bindinge7taxG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
IB12-bindinge7taxI1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
HB12-bindinge7taxH1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)
CB12-bindinge7taxC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: B12-bindingECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.30.70.2540 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CRISPR-associated endoribonuclease Cas6/Csy4CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR-associated protein Csy1- -
CRISPR type I-F/YPEST-associated protein Csy2- -
D, E, F, G, H
CRISPR type I-F/YPEST-associated protein Csy3- -
J, K
AcrIF24---
L [auth M]RNA (61-MER)---
N [auth X]DNA (5'-D(P*TP*TP*AP*GP*CP*TP*CP*GP*AP*AP*TP*CP*GP*AP*GP*CP*TP*AP*T)-3')---
M [auth Y]DNA (5'-D(P*AP*TP*AP*GP*CP*TP*CP*GP*AP*TP*TP*CP*GP*AP*GP*CP*TP*AP*A)-3')---
CRISPR-associated endonuclease Cas6/Csy4 -