7SPI | pdb_00007spi

Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208

External Resource: Annotation

Domain Annotation: ECOD Classification
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZB [auth F13]	AAA_lid_RFC1	e7spiF131	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
YB [auth F12]	AAA_lid_RFC1	e7spiF121	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
XB [auth F11]	AAA_lid_RFC1	e7spiF111	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
WB [auth F10]	AAA_lid_RFC1	e7spiF101	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
VB [auth F9]	AAA_lid_RFC1	e7spiF91	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
UB [auth F8]	AAA_lid_RFC1	e7spiF81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
TB [auth F7]	AAA_lid_RFC1	e7spiF71	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
SB [auth F6]	AAA_lid_RFC1	e7spiF61	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
RB [auth F5]	AAA_lid_RFC1	e7spiF51	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
QB [auth F4]	AAA_lid_RFC1	e7spiF41	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
PB [auth F3]	AAA_lid_RFC1	e7spiF31	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
OB [auth F2]	AAA_lid_RFC1	e7spiF21	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
NB [auth F1]	AAA_lid_RFC1	e7spiF11	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
MB [auth E13]	AAA_lid_RFC1	e7spiE131	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
LB [auth E12]	AAA_lid_RFC1	e7spiE121	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
KB [auth E11]	AAA_lid_RFC1	e7spiE111	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
JB [auth E10]	AAA_lid_RFC1	e7spiE101	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
IB [auth E9]	AAA_lid_RFC1	e7spiE91	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
HB [auth E8]	AAA_lid_RFC1	e7spiE81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
GB [auth E7]	AAA_lid_RFC1	e7spiE71	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
FB [auth E6]	AAA_lid_RFC1	e7spiE61	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
EB [auth E5]	AAA_lid_RFC1	e7spiE51	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
DB [auth E4]	AAA_lid_RFC1	e7spiE41	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
CB [auth E3]	AAA_lid_RFC1	e7spiE31	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
BB [auth E2]	AAA_lid_RFC1	e7spiE21	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)
AB [auth E1]	AAA_lid_RFC1	e7spiE11	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AAA_lid_RFC1	ECOD (v295.2)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AB [auth E1], BB [auth E2], CB [auth E3], DB [auth E4], EB [auth E5], AB [auth E1], BB [auth E2], CB [auth E3], DB [auth E4], EB [auth E5], FB [auth E6], GB [auth E7], HB [auth E8], IB [auth E9], JB [auth E10], KB [auth E11], LB [auth E12], MB [auth E13], NB [auth F1], OB [auth F2], PB [auth F3], QB [auth F4], RB [auth F5], SB [auth F6], TB [auth F7], UB [auth F8], VB [auth F9], WB [auth F10], XB [auth F11], YB [auth F12], ZB [auth F13]	IPR005498	Type IV secretion system, VirB10/TraB/TrbI	Family
AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], FA [auth C6], GA [auth C7], HA [auth C8], IA [auth C9], JA [auth C10], KA [auth C11], LA [auth C12], MA [auth C13], NA [auth D1], OA [auth D2], PA [auth D3], QA [auth D4], RA [auth D5], SA [auth D6], TA [auth D7], UA [auth D8], VA [auth D9], WA [auth D10], XA [auth D11], YA [auth D12], ZA [auth D13]	IPR055397	TraK, C-terminal domain	Domain
AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], FA [auth C6], GA [auth C7], HA [auth C8], IA [auth C9], JA [auth C10], KA [auth C11], LA [auth C12], MA [auth C13], NA [auth D1], OA [auth D2], PA [auth D3], QA [auth D4], RA [auth D5], SA [auth D6], TA [auth D7], UA [auth D8], VA [auth D9], WA [auth D10], XA [auth D11], YA [auth D12], ZA [auth D13]	IPR014126	Type-F conjugative transfer system secretin TraK	Family
AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], AA [auth C1], BA [auth C2], CA [auth C3], DA [auth C4], EA [auth C5], FA [auth C6], GA [auth C7], HA [auth C8], IA [auth C9], JA [auth C10], KA [auth C11], LA [auth C12], MA [auth C13], NA [auth D1], OA [auth D2], PA [auth D3], QA [auth D4], RA [auth D5], SA [auth D6], TA [auth D7], UA [auth D8], VA [auth D9], WA [auth D10], XA [auth D11], YA [auth D12], ZA [auth D13]	IPR010563	TraK, N-terminal	Domain
A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth A5], A [auth A1], B [auth A2], C [auth A3], D [auth A4], E [auth A5], F [auth A6], G [auth A7], H [auth A8], I [auth A9], J [auth A10], K [auth A11], L [auth A12], M [auth A13], N [auth B1], O [auth B2], P [auth B3], Q [auth B4], R [auth B5], S [auth B6], T [auth B7], U [auth B8], V [auth B9], W [auth B10], X [auth B11], Y [auth B12], Z [auth B13]	IPR014118	Type IV conjugative transfer system protein TraV	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth A1], AA [auth C1], B [auth A2], BA [auth C2], C [auth A3] A [auth A1], AA [auth C1], B [auth A2], BA [auth C2], C [auth A3], CA [auth C3], D [auth A4], DA [auth C4], E [auth A5], EA [auth C5], F [auth A6], FA [auth C6], G [auth A7], GA [auth C7], H [auth A8], HA [auth C8], I [auth A9], IA [auth C9], J [auth A10], JA [auth C10], K [auth A11], KA [auth C11], L [auth A12], LA [auth C12], M [auth A13], MA [auth C13], N [auth B1], NA [auth D1], O [auth B2], OA [auth D2], P [auth B3], PA [auth D3], Q [auth B4], QA [auth D4], R [auth B5], RA [auth D5], S [auth B6], SA [auth D6], T [auth B7], TA [auth D7], U [auth B8], UA [auth D8], V [auth B9], VA [auth D9], W [auth B10], WA [auth D10], X [auth B11], XA [auth D11], Y [auth B12], YA [auth D12], Z [auth B13], ZA [auth D13]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type IV Secretion Systems	outer-membrane core complex (inner ring) encoded by multi-drug resistance F plasmids, models for C13 reconstruction