7SG7 | pdb_00007sg7

In situ cryo-EM structure of bacteriophage Sf6 gp8:gp14N complex at 2.8 A resolution

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
W [auth R]	PF29847	e7sg7R1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
V [auth M]	PF29847	e7sg7M1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
U [auth H]	PF29847	e7sg7H1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
S [auth Q]	PF29847	e7sg7Q1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
R [auth L]	PF29847	e7sg7L1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
Q [auth G]	PF29847	e7sg7G1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
O [auth P]	PF29847	e7sg7P1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
N [auth K]	PF29847	e7sg7K1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
M [auth F]	PF29847	e7sg7F1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
K [auth O]	PF29847	e7sg7O1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
J	PF29847	e7sg7J1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
I [auth E]	PF29847	e7sg7E1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
G [auth N]	PF29847	e7sg7N1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
F [auth I]	PF29847	e7sg7I1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
E [auth D]	PF29847	e7sg7D1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
C	PF29847	e7sg7C1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
B	PF29847	e7sg7B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)
A	PF29847	e7sg7A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: PF29847	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], X	PF11134	Phage stabilisation protein (Phage_stabilise)	Phage stabilisation protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], X	Gene 8 protein	-	-	-
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	Gene 14 protein	hydrolase activity, acting on glycosyl bonds endo-1,3-alpha-L-rhamnosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity	biological process involved in interspecies interaction between organisms symbiont entry into host biological process involved in interaction with host biological process involved in symbiotic interaction virion attachment to host cell adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host symbiont-mediated disruption of host anatomical structure symbiont-mediated disruption of host cell envelope symbiont-mediated disruption of host cellular anatomical structure symbiont entry into host cell via disruption of host cell envelope symbiont entry into host cell biological process involved in interspecies interaction between organisms symbiont entry into host biological process involved in interaction with host biological process involved in symbiotic interaction virion attachment to host cell adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host symbiont-mediated disruption of host anatomical structure symbiont-mediated disruption of host cell envelope symbiont-mediated disruption of host cellular anatomical structure symbiont entry into host cell via disruption of host cell envelope symbiont entry into host cell disruption of anatomical structure in another organism symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide symbiont-mediated disruption of host cell wall	virus tail, fiber virus tail virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], D [auth T], H [auth S], L [auth U], P [auth V], T [auth W], X	IPR021098	Bacteriophage P22, Gp10, DNA-stabilising	Family
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	IPR012334	Pectin lyase fold	Homologous Superfamily
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	IPR036730	Phage P22 tailspike-like, N-terminal domain superfamily	Homologous Superfamily
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	IPR049104	Tail spike protein-like, C-terminal domain	Domain
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	IPR009093	Bacteriophage P22 tailspike, N-terminal	Domain
A, B, C, E [auth D], F [auth I], A, B, C, E [auth D], F [auth I], G [auth N], I [auth E], J, K [auth O], M [auth F], N [auth K], O [auth P], Q [auth G], R [auth L], S [auth Q], U [auth H], V [auth M], W [auth R]	IPR011050	Pectin lyase fold/virulence factor	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.